» Articles » PMID: 6160466

Phy M: an RNase Activity Specific for U and A Residues Useful in RNA Sequence Analysis

Overview
Specialty Biochemistry
Date 1980 Jul 25
PMID 6160466
Citations 140
Authors
Affiliations
Soon will be listed here.
Abstract

Physarum polycephalum, an acellular slime mold, produces an endoribonuclease activity (Phy M) useful in direct RNA sequence determination. Under conditions previously described for direct enzymatic RNA sequencing (7M urea, 50 degrees C, pH 5.0)1 Phy M cleaves almost exclusively and uniformly at Up-N and Ap-N. In the absence of urea Up-N, Ap-N, and Gp-N are attacked in a sequence specific way identical to that found with RNase Phy I2 digests performed under the same reaction conditions.

Citing Articles

A family of wheat embryo U2 snRNAs.

Skuzeski J, Jendrisak J Plant Mol Biol. 2013; 4(2-3):181-93.

PMID: 24310755 DOI: 10.1007/BF02418765.


A simple gene-expression system for the small subunit of ribulose bisphosphate carboxylase in leaves ofNicotiana sylvestris.

Pinck M, Dore J, Guilley E, Durr A, Pinck L, Hirth L Plant Mol Biol. 2013; 7(4):301-9.

PMID: 24302371 DOI: 10.1007/BF00752902.


5S-rRNA genes in rice embryos.

Hariharan N, Reddy P, Padayatty J Plant Mol Biol. 2013; 9(5):443-51.

PMID: 24277131 DOI: 10.1007/BF00015876.


Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system.

Takemoto C, Spremulli L, Benkowski L, Ueda T, Yokogawa T, Watanabe K Nucleic Acids Res. 2009; 37(5):1616-27.

PMID: 19151083 PMC: 2655697. DOI: 10.1093/nar/gkp001.


Enzymes used in molecular biology: a useful guide.

Rittie L, Perbal B J Cell Commun Signal. 2008; 2(1-2):25-45.

PMID: 18766469 PMC: 2570007. DOI: 10.1007/s12079-008-0026-2.


References
1.
Braun R, Behrens K . A ribonuclease from Physarum. Biochemical properties and synthesis in the mitotic cycle. Biochim Biophys Acta. 1969; 195(1):87-98. DOI: 10.1016/0005-2787(69)90605-4. View

2.
Rubin G . The nucleotide sequence of Saccharomyces cerevisiae 5.8 S ribosomal ribonucleic acid. J Biol Chem. 1973; 248(11):3860-75. View

3.
Adler P, Holt C . Genetic analysis in the colonia strain of Physarum polycephalum: heterothallic strains that mate with and are partially isogenic to the colonia strain. Genetics. 1974; 78(4):1051-62. PMC: 1213238. DOI: 10.1093/genetics/78.4.1051. View

4.
Contreras R, Fiers W . A method for the isolation of cytidylate series from ribonuclease T1-oligonucleotides. Anal Biochem. 1975; 67(1):319-26. DOI: 10.1016/0003-2697(75)90299-7. View

5.
Rubin G . Preparation of RNA and ribosomes from yeast. Methods Cell Biol. 1975; 12:45-64. DOI: 10.1016/s0091-679x(08)60951-6. View