Lai L, Lai S, Szymanski E, Kapur M, Choi E, Al-Hashimi H
Proc Natl Acad Sci U S A. 2022; 119(10):e2119529119.
PMID: 35238631
PMC: 8915964.
DOI: 10.1073/pnas.2119529119.
Fiorentini D, Cappadone C, Farruggia G, Prata C
Nutrients. 2021; 13(4).
PMID: 33808247
PMC: 8065437.
DOI: 10.3390/nu13041136.
Vibhute M, Schaap M, Maas R, Nelissen F, Spruijt E, Heus H
ACS Synth Biol. 2020; 9(10):2797-2807.
PMID: 32976714
PMC: 7573978.
DOI: 10.1021/acssynbio.0c00330.
Case D, Zubieta J, Doyle R
Molecules. 2020; 25(14).
PMID: 32664540
PMC: 7397051.
DOI: 10.3390/molecules25143172.
Ohyama T
Int J Mol Sci. 2019; 20(17).
PMID: 31470631
PMC: 6747271.
DOI: 10.3390/ijms20174232.
The Story of RNA Folding, as Told in Epochs.
Herschlag D, Bonilla S, Bisaria N
Cold Spring Harb Perspect Biol. 2018; 10(10).
PMID: 30275276
PMC: 6169817.
DOI: 10.1101/cshperspect.a032433.
Slow molecular recognition by RNA.
Gleitsman K, Sengupta R, Herschlag D
RNA. 2017; 23(12):1745-1753.
PMID: 28971853
PMC: 5688996.
DOI: 10.1261/rna.062026.117.
How Does Mg Modulate the RNA Folding Mechanism: A Case Study of the G:C W:W Trans Basepair.
Halder A, Roy R, Bhattacharyya D, Mitra A
Biophys J. 2017; 113(2):277-289.
PMID: 28506525
PMC: 5529177.
DOI: 10.1016/j.bpj.2017.04.029.
Kinetic and thermodynamic framework for P4-P6 RNA reveals tertiary motif modularity and modulation of the folding preferred pathway.
Bisaria N, Greenfeld M, Limouse C, Pavlichin D, Mabuchi H, Herschlag D
Proc Natl Acad Sci U S A. 2016; 113(34):E4956-65.
PMID: 27493222
PMC: 5003260.
DOI: 10.1073/pnas.1525082113.
Mg(2+)-induced conformational changes in the btuB riboswitch from E. coli.
Choudhary P, Sigel R
RNA. 2013; 20(1):36-45.
PMID: 24243114
PMC: 3866643.
DOI: 10.1261/rna.039909.113.
The long-range P3 helix of the Tetrahymena ribozyme is disrupted during folding between the native and misfolded conformations.
Mitchell 3rd D, Jarmoskaite I, Seval N, Seifert S, Russell R
J Mol Biol. 2013; 425(15):2670-86.
PMID: 23702292
PMC: 3706569.
DOI: 10.1016/j.jmb.2013.05.008.
RNA with iron(II) as a cofactor catalyses electron transfer.
Hsiao C, Chou I, Okafor C, Bowman J, ONeill E, Athavale S
Nat Chem. 2013; 5(6):525-8.
PMID: 23695635
DOI: 10.1038/nchem.1649.
Toward a molecular understanding of RNA remodeling by DEAD-box proteins.
Russell R, Jarmoskaite I, Lambowitz A
RNA Biol. 2012; 10(1):44-55.
PMID: 22995827
PMC: 3590237.
DOI: 10.4161/rna.22210.
RNA folding and catalysis mediated by iron (II).
Athavale S, Petrov A, Hsiao C, Watkins D, Prickett C, Gossett J
PLoS One. 2012; 7(5):e38024.
PMID: 22701543
PMC: 3365117.
DOI: 10.1371/journal.pone.0038024.
Kinetics of tRNA folding monitored by aminoacylation.
Bhaskaran H, Rodriguez-Hernandez A, Perona J
RNA. 2012; 18(3):569-80.
PMID: 22286971
PMC: 3285943.
DOI: 10.1261/rna.030080.111.
Characterization of the kinetic and thermodynamic landscape of RNA folding using a novel application of isothermal titration calorimetry.
Vander Meulen K, Butcher S
Nucleic Acids Res. 2011; 40(5):2140-51.
PMID: 22058128
PMC: 3300012.
DOI: 10.1093/nar/gkr894.
The shape-shifting quasispecies of RNA: one sequence, many functional folds.
Marek M, Johnson-Buck A, Walter N
Phys Chem Chem Phys. 2011; 13(24):11524-37.
PMID: 21603685
PMC: 3359863.
DOI: 10.1039/c1cp20576e.
Removal of covalent heterogeneity reveals simple folding behavior for P4-P6 RNA.
Greenfeld M, Solomatin S, Herschlag D
J Biol Chem. 2011; 286(22):19872-9.
PMID: 21478155
PMC: 3103363.
DOI: 10.1074/jbc.M111.235465.
Roles of DEAD-box proteins in RNA and RNP Folding.
Pan C, Russell R
RNA Biol. 2010; 7(6):667-76.
PMID: 21045543
PMC: 3073326.
DOI: 10.4161/rna.7.6.13571.
Multiple native states reveal persistent ruggedness of an RNA folding landscape.
Solomatin S, Greenfeld M, Chu S, Herschlag D
Nature. 2010; 463(7281):681-4.
PMID: 20130651
PMC: 2818749.
DOI: 10.1038/nature08717.