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The Genome Sequence of a Cranefly, (Meigen, 1818)

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Date 2025 Mar 3
PMID 40027408
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Abstract

We present a genome assembly from a specimen of (cranefly; Arthropoda; Insecta; Diptera; Cylindrotomidae). The genome sequence has a total length of 1,328.70 megabases. Most of the assembly (90.7%) is scaffolded into 4 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 17.5 kilobases in length.

References
1.
Formenti G, Abueg L, Brajuka A, Brajuka N, Gallardo-Alba C, Giani A . Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs. Bioinformatics. 2022; 38(17):4214-4216. PMC: 9438950. DOI: 10.1093/bioinformatics/btac460. View

2.
. UniProt: the Universal Protein Knowledgebase in 2023. Nucleic Acids Res. 2022; 51(D1):D523-D531. PMC: 9825514. DOI: 10.1093/nar/gkac1052. View

3.
Rao S, Huntley M, Durand N, Stamenova E, Bochkov I, Robinson J . A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell. 2014; 159(7):1665-80. PMC: 5635824. DOI: 10.1016/j.cell.2014.11.021. View

4.
Uliano-Silva M, R N Ferreira J, Krasheninnikova K, Formenti G, Abueg L, Torrance J . MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads. BMC Bioinformatics. 2023; 24(1):288. PMC: 10354987. DOI: 10.1186/s12859-023-05385-y. View

5.
Veiga Leprevost F, Gruning B, Alves Aflitos S, Rost H, Uszkoreit J, Barsnes H . BioContainers: an open-source and community-driven framework for software standardization. Bioinformatics. 2017; 33(16):2580-2582. PMC: 5870671. DOI: 10.1093/bioinformatics/btx192. View