» Articles » PMID: 39917186

Application of Signal Separation to Diffraction Image Compression and Serial Crystallography

Overview
Date 2025 Feb 7
PMID 39917186
Authors
Affiliations
Soon will be listed here.
Abstract

We present here a methodology for real-time analysis of diffraction images acquired at a high frame rate (925 Hz) and its application to macromolecular serial crystallography at ESRF. We introduce a new signal-separation algorithm, able to distinguish the amorphous (or powder diffraction) component from the diffraction signal originating from single crystals. It relies on the ability to work efficiently in azimuthal space and is implemented in , the fast azimuthal integration library. Two applications are built upon this separation algorithm: a lossy compression algorithm and a peak-picking algorithm. The performances of both are assessed by comparing data quality after reduction with and .

References
1.
Karplus P, Diederichs K . Linking crystallographic model and data quality. Science. 2012; 336(6084):1030-3. PMC: 3457925. DOI: 10.1126/science.1218231. View

2.
Kieffer J, Valls V, Blanc N, Hennig C . New tools for calibrating diffraction setups. J Synchrotron Radiat. 2020; 27(Pt 2):558-566. PMC: 7842211. DOI: 10.1107/S1600577520000776. View

3.
Gasparotto P, Barba L, Stadler H, Assmann G, Mendonca H, Ashton A . : a -based indexing algorithm for kilohertz serial crystallography. J Appl Crystallogr. 2024; 57(Pt 4):931-944. PMC: 11299607. DOI: 10.1107/S1600576724003182. View

4.
Maia F . The Coherent X-ray Imaging Data Bank. Nat Methods. 2012; 9(9):854-5. DOI: 10.1038/nmeth.2110. View

5.
Gati C, Bourenkov G, Klinge M, Rehders D, Stellato F, Oberthur D . Serial crystallography on in vivo grown microcrystals using synchrotron radiation. IUCrJ. 2014; 1(Pt 2):87-94. PMC: 4062088. DOI: 10.1107/S2052252513033939. View