Kieffer J, Orlans J, Coquelle N, Debionne S, Basu S, Homs A
J Appl Crystallogr. 2025; 58(Pt 1):138-153.
PMID: 39917186
PMC: 11798513.
DOI: 10.1107/S1600576724011038.
Saraiva B, Cunha I, Brito A, Follain G, Portela R, Haase R
Nat Methods. 2025; 22(2):283-286.
PMID: 39747509
PMC: 11810771.
DOI: 10.1038/s41592-024-02562-6.
Ren W, Liang Z
Mol Genet Genomics. 2024; 300(1):10.
PMID: 39738695
DOI: 10.1007/s00438-024-02214-6.
Gangavarapu K, Ji X, Baele G, Fourment M, Lemey P, Matsen 4th F
Bioinformatics. 2024; 40(2).
PMID: 38243701
PMC: 10868298.
DOI: 10.1093/bioinformatics/btae030.
Reska D, Kretowski M
Sci Rep. 2024; 14(1):1444.
PMID: 38228773
PMC: 10792028.
DOI: 10.1038/s41598-024-51452-6.
High-fidelity 3D live-cell nanoscopy through data-driven enhanced super-resolution radial fluctuation.
Laine R, Heil H, Coelho S, Nixon-Abell J, Jimenez A, Wiesner T
Nat Methods. 2023; 20(12):1949-1956.
PMID: 37957430
PMC: 10703683.
DOI: 10.1038/s41592-023-02057-w.
A Perspective on Sustainable Computational Chemistry Software Development and Integration.
Di Felice R, Mayes M, Richard R, Williams-Young D, Chan G, de Jong W
J Chem Theory Comput. 2023; 19(20):7056-7076.
PMID: 37769271
PMC: 10601486.
DOI: 10.1021/acs.jctc.3c00419.
OpenVVC Decoder Parameterized and Interfaced Synchronous Dataflow (PiSDF) Model: Tile Based Parallelism.
Haggui N, Hamidouche W, Belghith F, Masmoudi N, Nezan J
J Signal Process Syst. 2022; :1-13.
PMID: 36268535
PMC: 9569024.
DOI: 10.1007/s11265-022-01819-7.
High Performance Computing PP-Distance Algorithms to Generate X-ray Spectra from 3D Models.
Gonzalez C, Balocco S, Bosch J, de Haro J, Paolini M, Filgueras A
Int J Mol Sci. 2022; 23(19).
PMID: 36232709
PMC: 9570381.
DOI: 10.3390/ijms231911408.
A Review of Parallel Implementations for the Smith-Waterman Algorithm.
Xia Z, Cui Y, Zhang A, Tang T, Peng L, Huang C
Interdiscip Sci. 2021; 14(1):1-14.
PMID: 34487327
PMC: 8419822.
DOI: 10.1007/s12539-021-00473-0.
Kinetic Analysis of Acanthamoeba castellanii Infected with Giant Viruses Quantitatively Revealed Process of Morphological and Behavioral Changes in Host Cells.
Fukaya S, Takemura M
Microbiol Spectr. 2021; 9(1):e0036821.
PMID: 34431709
PMC: 8552732.
DOI: 10.1128/Spectrum.00368-21.
Accelerating On-Device Learning with Layer-Wise Processor Selection Method on Unified Memory.
Ha D, Kim M, Moon K, Jeong C
Sensors (Basel). 2021; 21(7).
PMID: 33805349
PMC: 8037599.
DOI: 10.3390/s21072364.
Quantitative Study of the Chiral Organization of the Phage Genome Induced by the Packaging Motor.
Cruz B, Zhu Z, Calderer C, Arsuaga J, Vazquez M
Biophys J. 2020; 118(9):2103-2116.
PMID: 32353255
PMC: 7203069.
DOI: 10.1016/j.bpj.2020.03.030.
OptiJ: Open-source optical projection tomography of large organ samples.
Vallejo Ramirez P, Zammit J, Vanderpoorten O, Riche F, Ble F, Zhou X
Sci Rep. 2019; 9(1):15693.
PMID: 31666606
PMC: 6821862.
DOI: 10.1038/s41598-019-52065-0.
Research on OpenCL optimization for FPGA deep learning application.
Zhang S, Wu Y, Men C, He H, Liang K
PLoS One. 2019; 14(10):e0222984.
PMID: 31600218
PMC: 6786543.
DOI: 10.1371/journal.pone.0222984.
Pose Estimation of Periacetabular Osteotomy Fragments With Intraoperative X-Ray Navigation.
Grupp R, Hegeman R, Murphy R, Alexander C, Otake Y, McArthur B
IEEE Trans Biomed Eng. 2019; 67(2):441-452.
PMID: 31059424
PMC: 7297497.
DOI: 10.1109/TBME.2019.2915165.
ALMARVI Execution Platform: Heterogeneous Video Processing SoC Platform on FPGA.
Hoozemans J, van Straten J, Viitanen T, Tervo A, Kadlec J, Al-Ars Z
J Signal Process Syst. 2019; 91(1):61-73.
PMID: 30873260
PMC: 6390713.
DOI: 10.1007/s11265-018-1424-1.
Frame-based Programming, Stream-Based Processing for Medical Image Processing Applications.
Hoozemans J, de Jong R, van der Vlugt S, van Straten J, Elango U, Al-Ars Z
J Signal Process Syst. 2019; 91(1):47-59.
PMID: 30873259
PMC: 6390719.
DOI: 10.1007/s11265-018-1422-3.
Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes.
Hernandez-Fernandez M, Reguly I, Jbabdi S, Giles M, Smith S, Sotiropoulos S
Neuroimage. 2018; 188:598-615.
PMID: 30537563
PMC: 6614035.
DOI: 10.1016/j.neuroimage.2018.12.015.
Fast Visual Odometry for a Low-Cost Underwater Embedded Stereo System .
Nawaf M, Merad D, Royer J, Boi J, Saccone M, Ben Ellefi M
Sensors (Basel). 2018; 18(7).
PMID: 30018215
PMC: 6068653.
DOI: 10.3390/s18072313.
