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SARS-CoV-2 Spike Does Not Interact with the T Cell Receptor or Directly Activate T Cells

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Specialty Science
Date 2024 Jul 23
PMID 39042676
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Abstract

SARS-CoV-2infection can induce multisystem inflammatory syndrome in children, which resembles superantigen-induced toxic shock syndrome. Recent work has suggested that the SARS-CoV-2 spike (S) protein could act as a superantigen by binding T cell receptors (TCRs) and inducing broad antigen-independent T cell responses. Structure-based computational modeling identified potential TCR-binding sites near the S receptor-binding domain, in addition to a site with homology to known neurotoxins. We experimentally examined the mechanism underpinning this theory-the direct interaction between the TCR and S protein. Surface plasmon resonance of recombinantly expressed S protein and TCR revealed no detectable binding. Orthogonally, we pseudotyped lentiviruses with SARS-CoV-2 S in both wild-type and prefusion-stabilized forms, demonstrated their functionality in a cell line assay, and observed no transduction, activation, or stimulation of proliferation of CD8 T cells. We conclude that it is unlikely that the SARS-CoV-2 spike protein engages nonspecifically with TCRs or has superantigenic character.

References
1.
Wrapp D, Wang N, Corbett K, Goldsmith J, Hsieh C, Abiona O . Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation. Science. 2020; 367(6483):1260-1263. PMC: 7164637. DOI: 10.1126/science.abb2507. View

2.
Cheng M, Porritt R, Noval Rivas M, Krieger J, Ozdemir A, Garcia Jr G . A monoclonal antibody against staphylococcal enterotoxin B superantigen inhibits SARS-CoV-2 entry in vitro. Structure. 2021; 29(9):951-962.e3. PMC: 8082696. DOI: 10.1016/j.str.2021.04.005. View

3.
Baek M, DiMaio F, Anishchenko I, Dauparas J, Ovchinnikov S, Lee G . Accurate prediction of protein structures and interactions using a three-track neural network. Science. 2021; 373(6557):871-876. PMC: 7612213. DOI: 10.1126/science.abj8754. View

4.
Bradley P . Structure-based prediction of T cell receptor:peptide-MHC interactions. Elife. 2023; 12. PMC: 9859041. DOI: 10.7554/eLife.82813. View

5.
Lu J, Van Laethem F, Saba I, Chu J, Tikhonova A, Bhattacharya A . Structure of MHC-Independent TCRs and Their Recognition of Native Antigen CD155. J Immunol. 2020; 204(12):3351-3359. PMC: 7390066. DOI: 10.4049/jimmunol.1901084. View