» Articles » PMID: 39026797

Post-transcriptional Cross- and Auto-regulation Buffer Expression of the Human RNA Helicases and

Overview
Journal bioRxiv
Date 2024 Jul 19
PMID 39026797
Authors
Affiliations
Soon will be listed here.
Abstract

The Y-linked gene and its X-linked homolog survived the evolution of the human sex chromosomes from ordinary autosomes. encodes a multi-functional RNA helicase, with mutations causing developmental disorders and cancers. We find that, among X-linked genes with surviving Y homologs, is extraordinarily dosage-sensitive. Studying cells of individuals with sex chromosome aneuploidy, we observe that when the number of Y chromosomes increases, transcript levels fall; conversely, when the number of X chromosomes increases, transcript levels fall. In 46,XY cells, CRISPRi knockdown of either or causes transcript levels of the homologous gene to rise. In 46,XX cells, chemical inhibition of DDX3X protein activity elicits an increase in transcript levels. Thus, perturbation of either or expression is buffered - by negative cross-regulation of and in 46,XY cells, and by negative auto-regulation of in 46,XX cells. - cross-regulation is mediated through mRNA destabilization - as shown by metabolic labeling of newly transcribed RNA - and buffers total levels of DDX3X and DDX3Y protein in human cells. We infer that post-transcriptional auto-regulation of the ancestral (autosomal) gene transmuted into auto- and cross-regulation of and as these sex-linked genes evolved from ordinary alleles of their autosomal precursor.

Citing Articles

Multi-modal investigation reveals pathogenic features of diverse DDX3X missense mutations.

Mosti F, Hoye M, Escobar-Tomlienovich C, Silver D PLoS Genet. 2025; 21(1):e1011555.

PMID: 39836689 PMC: 11771946. DOI: 10.1371/journal.pgen.1011555.

References
1.
Sun C, Skaletsky H, Rozen S, Gromoll J, Nieschlag E, Oates R . Deletion of azoospermia factor a (AZFa) region of human Y chromosome caused by recombination between HERV15 proviruses. Hum Mol Genet. 2000; 9(15):2291-6. DOI: 10.1093/oxfordjournals.hmg.a018920. View

2.
Sekiguchi T, Iida H, Fukumura J, Nishimoto T . Human DDX3Y, the Y-encoded isoform of RNA helicase DDX3, rescues a hamster temperature-sensitive ET24 mutant cell line with a DDX3X mutation. Exp Cell Res. 2004; 300(1):213-22. DOI: 10.1016/j.yexcr.2004.07.005. View

3.
Kumar S, Suleski M, Craig J, Kasprowicz A, Sanderford M, Li M . TimeTree 5: An Expanded Resource for Species Divergence Times. Mol Biol Evol. 2022; . PMC: 9400175. DOI: 10.1093/molbev/msac174. View

4.
Bellott D, Hughes J, Skaletsky H, Brown L, Pyntikova T, Cho T . Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators. Nature. 2014; 508(7497):494-9. PMC: 4139287. DOI: 10.1038/nature13206. View

5.
Lahn B, Page D . Four evolutionary strata on the human X chromosome. Science. 1999; 286(5441):964-7. DOI: 10.1126/science.286.5441.964. View