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AlphaFold3 Takes a Step Toward Decoding Molecular Behavior and Biological Computation

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Date 2024 Jul 8
PMID 38977902
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References
1.
Abramson J, Adler J, Dunger J, Evans R, Green T, Pritzel A . Accurate structure prediction of biomolecular interactions with AlphaFold 3. Nature. 2024; 630(8016):493-500. PMC: 11168924. DOI: 10.1038/s41586-024-07487-w. View

2.
Al-Hashimi H . Turing, von Neumann, and the computational architecture of biological machines. Proc Natl Acad Sci U S A. 2023; 120(25):e2220022120. PMC: 10288622. DOI: 10.1073/pnas.2220022120. View

3.
Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O . Highly accurate protein structure prediction with AlphaFold. Nature. 2021; 596(7873):583-589. PMC: 8371605. DOI: 10.1038/s41586-021-03819-2. View

4.
Tunyasuvunakool K, Adler J, Wu Z, Green T, Zielinski M, Zidek A . Highly accurate protein structure prediction for the human proteome. Nature. 2021; 596(7873):590-596. PMC: 8387240. DOI: 10.1038/s41586-021-03828-1. View

5.
Berman H, Westbrook J, Feng Z, Gilliland G, Bhat T, Weissig H . The Protein Data Bank. Nucleic Acids Res. 1999; 28(1):235-42. PMC: 102472. DOI: 10.1093/nar/28.1.235. View