» Articles » PMID: 37174593

Molecular Characterization and Functional Analysis of Hypoxia-Responsive Factor Prolyl Hydroxylase Domain 2 in Mandarin Fish ()

Overview
Journal Animals (Basel)
Date 2023 May 13
PMID 37174593
Authors
Affiliations
Soon will be listed here.
Abstract

With increased breeding density, the phenomenon of hypoxia gradually increases in aquaculture. Hypoxia is primarily mediated by the hypoxia-inducible factor 1 (HIF-1) signaling pathway. Prolyl hydroxylase domain proteins (PHD) are cellular oxygen-sensing molecules that regulate the stability of HIF-1α through hydroxylation. In this study, the characterization of the PHD2 from mandarin fish (PHD2) and its roles in the HIF-1 signaling pathway were investigated. Bioinformation analysis showed that PHD2 had the conserved prolyl 4-hydroxylase alpha subunit homolog domains at its C-terminal and was more closely related to other Perciformes PHD2 than other PHD2. Tissue-distribution results revealed that gene was expressed in all tissues tested and more highly expressed in blood and liver than in other tested tissues. Dual-luciferase reporter gene and RT-qPCR assays showed that PHD2 overexpression could significantly inhibit the HIF-1 signaling pathway. Co-immunoprecipitation analysis showed that PHD2 could interact with HIF-1α. Protein degradation experiment results suggested that PHD2 could promote HIF-1α degradation through the proteasome degradation pathway. This study advances our understanding of how the HIF-1 signaling pathway is regulated by PHD2 and will help in understanding the molecular mechanisms underlying hypoxia adaptation in teleost fish.

Citing Articles

Ring finger protein 5 mediates STING degradation through ubiquitinating K135 and K155 in a teleost fish.

Qin X, Li C, Liang M, Qian Z, You Y, Weng S Front Immunol. 2024; 15:1525376.

PMID: 39723209 PMC: 11668637. DOI: 10.3389/fimmu.2024.1525376.


Antioxidant Capacity, Enzyme Activities Related to Energy Metabolism, and Transcriptome Analysis of Exposed to Hypoxia.

He P, Li W, Wei P, Jiang L, Guan J, Ma Y Antioxidants (Basel). 2024; 13(9).

PMID: 39334722 PMC: 11429291. DOI: 10.3390/antiox13091063.


Genome-wide identification, characterization, and expression analysis of the transient receptor potential gene family in mandarin fish Siniperca chuatsi.

Li C, Qin X, Liang M, Luo Z, Zhan Z, Weng S BMC Genomics. 2024; 25(1):848.

PMID: 39251938 PMC: 11386371. DOI: 10.1186/s12864-024-10757-6.


Evolution of Key Oxygen-Sensing Genes Is Associated with Hypoxia Tolerance in Fishes.

Babin C, Leiva F, Verberk W, Rees B Genome Biol Evol. 2024; 16(9).

PMID: 39165136 PMC: 11370800. DOI: 10.1093/gbe/evae183.


Molecular mechanism of infectious spleen and kidney necrosis virus in manipulating the hypoxia-inducible factor pathway to augment virus replication.

He J, Yu Y, Liu W, Li Z, Qi Z, Weng S Virulence. 2024; 15(1):2349027.

PMID: 38680083 PMC: 11085990. DOI: 10.1080/21505594.2024.2349027.


References
1.
Giaccia A, Simon M, Johnson R . The biology of hypoxia: the role of oxygen sensing in development, normal function, and disease. Genes Dev. 2004; 18(18):2183-94. PMC: 517513. DOI: 10.1101/gad.1243304. View

2.
Hochachka P, Lutz P . Mechanism, origin, and evolution of anoxia tolerance in animals. Comp Biochem Physiol B Biochem Mol Biol. 2001; 130(4):435-59. DOI: 10.1016/s1096-4959(01)00408-0. View

3.
Freeman R, Hasbani D, Lipscomb E, Straub J, Xie L . SM-20, EGL-9, and the EGLN family of hypoxia-inducible factor prolyl hydroxylases. Mol Cells. 2003; 16(1):1-12. View

4.
Freedman S, Sun Z, Poy F, Kung A, Livingston D, Wagner G . Structural basis for recruitment of CBP/p300 by hypoxia-inducible factor-1 alpha. Proc Natl Acad Sci U S A. 2002; 99(8):5367-72. PMC: 122775. DOI: 10.1073/pnas.082117899. View

5.
Semenza G . Hydroxylation of HIF-1: oxygen sensing at the molecular level. Physiology (Bethesda). 2004; 19:176-82. DOI: 10.1152/physiol.00001.2004. View