Control of RNA Degradation in Cell Fate Decision
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Cell fate is shaped by a unique gene expression program, which reflects the concerted action of multilayered precise regulation. Substantial research attention has been paid to the contribution of RNA biogenesis to cell fate decisions. However, increasing evidence shows that RNA degradation, well known for its function in RNA processing and the surveillance of aberrant transcripts, is broadly engaged in cell fate decisions, such as maternal-to-zygotic transition (MZT), stem cell differentiation, or somatic cell reprogramming. In this review, we first look at the diverse RNA degradation pathways in the cytoplasm and nucleus. Then, we summarize how selective transcript clearance is regulated and integrated into the gene expression regulation network for the establishment, maintenance, and exit from a special cellular state.
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DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs.
Miao W, Porter D, Siprashvili Z, Ferguson I, Ducoli L, Nguyen D Cell Rep. 2025; 44(1):115174.
PMID: 39764852 PMC: 11875220. DOI: 10.1016/j.celrep.2024.115174.
A lineage-specific nascent RNA assay unveils principles of gene regulation in tissue biology.
Chovatiya G, Wang A, Versluis P, Bai C, Huang S, DeBerardine M bioRxiv. 2024; .
PMID: 39464031 PMC: 11507779. DOI: 10.1101/2024.10.15.618417.
Post-transcriptional regulation as a conserved driver of neural crest and cancer-cell migration.
Rajan A, Hutchins E Curr Opin Cell Biol. 2024; 89:102400.
PMID: 39032482 PMC: 11346372. DOI: 10.1016/j.ceb.2024.102400.
Orb2 enables rare-codon-enriched mRNA expression during Drosophila neuron differentiation.
Stewart R, Nguyen P, Laederach A, Volkan P, Sawyer J, Fox D Nat Commun. 2024; 15(1):5270.
PMID: 38902233 PMC: 11190236. DOI: 10.1038/s41467-024-48344-8.