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Evaluation of Darunavir-derived HIV-1 Protease Inhibitors Incorporating P2' Amide-derivatives: Synthesis, Biological Evaluation and Structural Studies

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Specialty Biochemistry
Date 2023 Feb 4
PMID 36738797
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Abstract

We report here the synthesis and biological evaluation of darunavir derived HIV-1 protease inhibitors and their functional effect on enzyme inhibition and antiviral activity in MT-2 cell lines. The P2' 4-amino functionality was modified to make a number of amide derivatives to interact with residues in the S2' subsite of the HIV-1 protease active site. Several compounds exhibited picomolar enzyme inhibitory and low nanomolar antiviral activity. The X-ray crystal structure of the chloroacetate derivative bound to HIV-1 protease was determined. Interestingly, the active chloroacetate group converted to the acetate functionality during X-ray exposure. The structure revealed that the P2' carboxamide functionality makes enhanced hydrogen bonding interactions with the backbone atoms in the S2'-subsite.

References
1.
Hayashi H, Takamune N, Nirasawa T, Aoki M, Morishita Y, Das D . Dimerization of HIV-1 protease occurs through two steps relating to the mechanism of protease dimerization inhibition by darunavir. Proc Natl Acad Sci U S A. 2014; 111(33):12234-9. PMC: 4142999. DOI: 10.1073/pnas.1400027111. View

2.
Shen C, Tie Y, Yu X, Wang Y, Kovalevsky A, Harrison R . Capturing the reaction pathway in near-atomic-resolution crystal structures of HIV-1 protease. Biochemistry. 2012; 51(39):7726-32. PMC: 3476052. DOI: 10.1021/bi3008092. View

3.
Ghosh A, Dawson Z, Mitsuya H . Darunavir, a conceptually new HIV-1 protease inhibitor for the treatment of drug-resistant HIV. Bioorg Med Chem. 2007; 15(24):7576-80. PMC: 2112938. DOI: 10.1016/j.bmc.2007.09.010. View

4.
Windsor I, Palte M, Lukesh 3rd J, Gold B, Forest K, Raines R . Sub-picomolar Inhibition of HIV-1 Protease with a Boronic Acid. J Am Chem Soc. 2018; 140(43):14015-14018. PMC: 6249028. DOI: 10.1021/jacs.8b07366. View

5.
Koh Y, Nakata H, Maeda K, Ogata H, Bilcer G, Devasamudram T . Novel bis-tetrahydrofuranylurethane-containing nonpeptidic protease inhibitor (PI) UIC-94017 (TMC114) with potent activity against multi-PI-resistant human immunodeficiency virus in vitro. Antimicrob Agents Chemother. 2003; 47(10):3123-9. PMC: 201142. DOI: 10.1128/AAC.47.10.3123-3129.2003. View