» Articles » PMID: 36699703

Structural Insights into 3Fe-4S Ferredoxins Diversity in Highlighted by a First Redox Complex with P450

Abstract

Ferredoxins are small iron-sulfur proteins and key players in essential metabolic pathways. Among all types, 3Fe-4S ferredoxins are less studied mostly due to anaerobic requirements. Their complexes with cytochrome P450 redox partners have not been structurally characterized. In the present work, we solved the structures of both 3Fe-4S ferredoxins from -Fdx alone and the fusion FdxE-CYP143. Our SPR analysis demonstrated a high-affinity binding of FdxE to CYP143. According to SAXS data, the same complex is present in solution. The structure reveals extended multipoint interactions and the shape/charge complementarity of redox partners. Furthermore, FdxE binding induced conformational changes in CYP143 as evident from the solved CYP143 structure alone. The comparison of FdxE-CYP143 and modeled Fdx-CYP51 complexes further revealed the specificity of ferredoxins. Our results illuminate the diversity of electron transfer complexes for the production of different secondary metabolites.

Citing Articles

Analysis of the Setomimycin Biosynthetic Gene Cluster from JCM3382 and Evaluation of Its α-Glucosidase Inhibitory Activity Using Molecular Docking and Molecular Dynamics Simulations.

Hyun K, Liang X, Xu Y, Kim S, Boo K, Park J Int J Mol Sci. 2024; 25(19).

PMID: 39409089 PMC: 11476836. DOI: 10.3390/ijms251910758.


Ferredoxins: Functions, Evolution, Potential Applications, and Challenges of Subtype Classification.

Syed K Curr Issues Mol Biol. 2024; 46(9):9659-9673.

PMID: 39329926 PMC: 11430716. DOI: 10.3390/cimb46090574.


Antimycobacterial Activities of Hydroxamic Acids and Their Iron(II/III), Nickel(II), Copper(II) and Zinc(II) Complexes.

Yang D, Zhang Y, Sow I, Liang H, El Manssouri N, Gelbcke M Microorganisms. 2023; 11(10).

PMID: 37894269 PMC: 10609363. DOI: 10.3390/microorganisms11102611.

References
1.
Mohamed H, Child S, Bruning J, Bell S . A comparison of the bacterial CYP51 cytochrome P450 enzymes from Mycobacterium marinum and Mycobacterium tuberculosis. J Steroid Biochem Mol Biol. 2022; 221:106097. DOI: 10.1016/j.jsbmb.2022.106097. View

2.
Li S, Du L, Bernhardt R . Redox Partners: Function Modulators of Bacterial P450 Enzymes. Trends Microbiol. 2020; 28(6):445-454. DOI: 10.1016/j.tim.2020.02.012. View

3.
Lin H, Ascher D, Myung Y, Lamborg C, Hallam S, Gionfriddo C . Mercury methylation by metabolically versatile and cosmopolitan marine bacteria. ISME J. 2021; 15(6):1810-1825. PMC: 8163782. DOI: 10.1038/s41396-020-00889-4. View

4.
Lu Y, Qiao F, Li Y, Sang X, Li C, Jiang J . Recombinant expression and biochemical characterization of Mycobacterium tuberculosis 3Fe-4S ferredoxin Rv1786. Appl Microbiol Biotechnol. 2017; 101(19):7201-7212. DOI: 10.1007/s00253-017-8454-7. View

5.
Emsley P, Lohkamp B, Scott W, Cowtan K . Features and development of Coot. Acta Crystallogr D Biol Crystallogr. 2010; 66(Pt 4):486-501. PMC: 2852313. DOI: 10.1107/S0907444910007493. View