» Articles » PMID: 36346211

Alternative Splicing Downstream of EMT Enhances Phenotypic Plasticity and Malignant Behavior in Colon Cancer

Overview
Journal Elife
Specialty Biology
Date 2022 Nov 8
PMID 36346211
Authors
Affiliations
Soon will be listed here.
Abstract

Phenotypic plasticity allows carcinoma cells to transiently acquire the quasi-mesenchymal features necessary to detach from the primary mass and proceed along the invasion-metastasis cascade. A broad spectrum of epigenetic mechanisms is likely to cause the epithelial-to-mesenchymal (EMT) and mesenchymal-to-epithelial (MET) transitions necessary to allow local dissemination and distant metastasis. Here, we report on the role played by alternative splicing (AS) in eliciting phenotypic plasticity in epithelial malignancies with focus on colon cancer. By taking advantage of the coexistence of subpopulations of fully epithelial (EpCAM) and quasi-mesenchymal and highly metastatic (EpCAM) cells in conventional human cancer cell lines, we here show that the differential expression of and other RNA-binding proteins (RBPs) downstream of the EMT master regulator alters the AS pattern of a broad spectrum of targets including and , thus resulting in the generation of specific isoforms functionally associated with increased invasion and metastasis. Additional functional and clinical validation studies indicate that both the newly identified RBPs and the CD44s and NUMB2/4 splicing isoforms promote local invasion and distant metastasis and are associated with poor survival in colon cancer. The systematic elucidation of the spectrum of EMT-related RBPs and AS targets in epithelial cancers, apart from the insights in the mechanisms underlying phenotypic plasticity, will lead to the identification of novel and tumor-specific therapeutic targets.

Citing Articles

RBM10 loss promotes metastases by aberrant splicing of cytoskeletal and extracellular matrix mRNAs.

Krishnamoorthy G, Glover A, Untch B, Sigcha-Coello N, Xu B, Vukel D J Exp Med. 2025; 222(5).

PMID: 39992626 PMC: 11849553. DOI: 10.1084/jem.20241029.


Specific modulation of 28S_Um2402 rRNA 2'--ribose methylation as a novel epitranscriptomic marker of ZEB1-induced epithelial-mesenchymal transition in different mammary cell contexts.

Morin C, Paraqindes H, Nguyen Van Long F, Isaac C, Thomas E, Pedri D NAR Cancer. 2025; 7(1):zcaf001.

PMID: 39877292 PMC: 11773364. DOI: 10.1093/narcan/zcaf001.


NUMB alternative splicing and isoform-specific functions in development and disease.

Dho S, Othman K, Zhang Y, McGlade C J Biol Chem. 2025; 301(3):108215.

PMID: 39863103 PMC: 11889595. DOI: 10.1016/j.jbc.2025.108215.


The SW480 cell line as a model of resident and migrating colon cancer stem cells.

Verhagen M, Xu T, Stabile R, Joosten R, Tucci F, van Royen M iScience. 2024; 27(9):110658.

PMID: 39246444 PMC: 11379671. DOI: 10.1016/j.isci.2024.110658.


RBM10 loss induces aberrant splicing of cytoskeletal and extracellular matrix mRNAs and promotes metastatic fitness.

Krishnamoorthy G, Glover A, Untch B, Sigcha-Coello N, Xu B, Vukel D bioRxiv. 2024; .

PMID: 39026820 PMC: 11257529. DOI: 10.1101/2024.07.09.602730.


References
1.
Bergen V, Lange M, Peidli S, Wolf F, Theis F . Generalizing RNA velocity to transient cell states through dynamical modeling. Nat Biotechnol. 2020; 38(12):1408-1414. DOI: 10.1038/s41587-020-0591-3. View

2.
Varga J, Greten F . Cell plasticity in epithelial homeostasis and tumorigenesis. Nat Cell Biol. 2017; 19(10):1133-1141. DOI: 10.1038/ncb3611. View

3.
Lin G, Li J, Cai J, Zhang H, Xin Q, Wang N . RNA-binding Protein MBNL2 regulates Cancer Cell Metastasis through MiR-182-MBNL2-AKT Pathway. J Cancer. 2021; 12(22):6715-6726. PMC: 8518006. DOI: 10.7150/jca.62816. View

4.
Pillman K, Phillips C, Roslan S, Toubia J, Dredge B, Bert A . miR-200/375 control epithelial plasticity-associated alternative splicing by repressing the RNA-binding protein Quaking. EMBO J. 2018; 37(13). PMC: 6028027. DOI: 10.15252/embj.201899016. View

5.
Kim E, Kim J, Lee S, Lee H, Yoon J, Hong J . QKI, a miR-200 target gene, suppresses epithelial-to-mesenchymal transition and tumor growth. Int J Cancer. 2019; 145(6):1585-1595. DOI: 10.1002/ijc.32372. View