» Articles » PMID: 35991410

Hairy Root Transformation System As a Tool for CRISPR/Cas9-directed Genome Editing in Oilseed Rape ()

Overview
Journal Front Plant Sci
Date 2022 Aug 22
PMID 35991410
Authors
Affiliations
Soon will be listed here.
Abstract

Our study examined the mutation efficiency of the CRISPR/Cas9 method for tryptophan aminotransferase genes involved in the auxin biosynthesis pathway. We made nine CRISPR/Cas9 constructs with various promoters driving the expression of a Cas9 from (SaCas9) or a plant-codon-optimized Cas9 (pcoCas9). We developed a fast and efficient system for evaluating the variety and frequency of mutations caused by each construct using hairy roots. We showed that pcoCas9 is more efficient in mutating the targeted loci than SaCas9 and the presence of the NLS signal enhanced the chance of mutagenesis by 25%. The mutations were studied further in regenerated lines, and we determined the gene expression and heritability of the gene modifications in transgenic plants. Hairy root transformation combined with CRISPR/Cas9-mediated gene editing represents a fast and straightforward system for studying target gene function in the important oilseed crop .

Citing Articles

Engineering Agrobacterium for improved plant transformation.

Goralogia G, Willig C, Strauss S Plant J. 2025; 121(5):e70015.

PMID: 40051182 PMC: 11885899. DOI: 10.1111/tpj.70015.


CRISPR/Cas9-mediated efficient PlCYP81Q38 mutagenesis in Phryma leptostachya.

Pei Y, Cao W, Kong X, Wang S, Sun Z, Zuo Y Planta. 2025; 261(4):73.

PMID: 40029441 DOI: 10.1007/s00425-025-04657-6.


Efficient genetic transformation and gene editing of Chinese cabbage using Agrobacterium rhizogenes.

Wang Y, Yang X, Wang W, Wang Y, Chen X, Wu H Plant Physiol. 2024; 197(2).

PMID: 39404111 PMC: 11849774. DOI: 10.1093/plphys/kiae543.


Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses: insights from comparative analysis of Brassica type-A response regulators.

Nicolas Mala K, Skalak J, Zemlyanskaya E, Dolgikh V, Jedlickova V, Robert H J Exp Bot. 2024; 75(20):6346-6368.

PMID: 39171371 PMC: 11523033. DOI: 10.1093/jxb/erae335.


Injection-based hairy root induction and plant regeneration techniques in Brassicaceae.

Jedlickova V, Stefkova M, Mandakova T, Sanchez Lopez J, Sedlacek M, Lysak M Plant Methods. 2024; 20(1):29.

PMID: 38368430 PMC: 10874044. DOI: 10.1186/s13007-024-01150-1.


References
1.
Ding Y, Li H, Chen L, Xie K . Recent Advances in Genome Editing Using CRISPR/Cas9. Front Plant Sci. 2016; 7:703. PMC: 4877526. DOI: 10.3389/fpls.2016.00703. View

2.
White F, Taylor B, Huffman G, Gordon M, Nester E . Molecular and genetic analysis of the transferred DNA regions of the root-inducing plasmid of Agrobacterium rhizogenes. J Bacteriol. 1985; 164(1):33-44. PMC: 214207. DOI: 10.1128/jb.164.1.33-44.1985. View

3.
Kaya H, Mikami M, Endo A, Endo M, Toki S . Highly specific targeted mutagenesis in plants using Staphylococcus aureus Cas9. Sci Rep. 2016; 6:26871. PMC: 4881040. DOI: 10.1038/srep26871. View

4.
Allen G, Flores-Vergara M, Krasynanski S, Kumar S, Thompson W . A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide. Nat Protoc. 2007; 1(5):2320-5. DOI: 10.1038/nprot.2006.384. View

5.
Kirchner T, Niehaus M, Debener T, Schenk M, Herde M . Efficient generation of mutations mediated by CRISPR/Cas9 in the hairy root transformation system of Brassica carinata. PLoS One. 2017; 12(9):e0185429. PMC: 5609758. DOI: 10.1371/journal.pone.0185429. View