Genome Sequences of Foot-and-Mouth Disease Virus Serotype A and O Strains Obtained from Subclinically Infected Asian Buffalo in Pakistan

Overview

Journal Microbiol Resour Announc

Publisher American Society for Microbiology

Specialty Microbiology

Date 2022 Jul 21

PMID 35862920

Authors

Carolina Stenfeldt

Miranda Bertram

Lauren Holinka-Patterson

Ian Fish

Umer Farooq

Zaheer Ahmed

Ethan J Hartwig

George R Smoliga

Khalid Naeem

Luis Rodriguez

Jonathan Arzt

Affiliations

Soon will be listed here.

Abstract

We report the nearly full genome sequences of 14 isolates of serotype A foot-and-mouth disease virus and 5 isolates of serotype O, which were obtained from subclinically infected Asian buffalo in Pakistan in 2011 to 2012. Sequences from subclinically infected animals are rare and complement the more commonly available sequences from clinical cases.

References

Arzt J, Fish I, Bertram M, Smoliga G, Hartwig E, Pauszek S . Simultaneous and Staggered Foot-and-Mouth Disease Virus Coinfection of Cattle. J Virol. 2021; 95(24):e0165021. PMC: 8610595. DOI: 10.1128/JVI.01650-21. View

Omondi G, Gakuya F, Arzt J, Sangula A, Hartwig E, Pauszek S . The role of African buffalo in the epidemiology of foot-and-mouth disease in sympatric cattle and buffalo populations in Kenya. Transbound Emerg Dis. 2020; 67(5):2206-2221. DOI: 10.1111/tbed.13573. View

Valdazo-Gonzalez B, Polihronova L, Alexandrov T, Normann P, Knowles N, Hammond J . Reconstruction of the transmission history of RNA virus outbreaks using full genome sequences: foot-and-mouth disease virus in Bulgaria in 2011. PLoS One. 2012; 7(11):e49650. PMC: 3511503. DOI: 10.1371/journal.pone.0049650. View

Arzt J, White W, Thomsen B, Brown C . Agricultural diseases on the move early in the third millennium. Vet Pathol. 2010; 47(1):15-27. DOI: 10.1177/0300985809354350. View

Grubman M, Baxt B . Foot-and-mouth disease. Clin Microbiol Rev. 2004; 17(2):465-93. PMC: 387408. DOI: 10.1128/CMR.17.2.465-493.2004. View

Stenfeldt C, Arzt J . The Carrier Conundrum; A Review of Recent Advances and Persistent Gaps Regarding the Carrier State of Foot-and-Mouth Disease Virus. Pathogens. 2020; 9(3). PMC: 7157498. DOI: 10.3390/pathogens9030167. View

Stenfeldt C, Pacheco J, Smoliga G, Bishop E, Pauszek S, Hartwig E . Detection of Foot-and-mouth Disease Virus RNA and Capsid Protein in Lymphoid Tissues of Convalescent Pigs Does Not Indicate Existence of a Carrier State. Transbound Emerg Dis. 2014; 63(2):152-64. DOI: 10.1111/tbed.12235. View

Stenfeldt C, Pacheco J, Singanallur N, Vosloo W, Rodriguez L, Arzt J . Virulence beneath the fleece; a tale of foot-and-mouth disease virus pathogenesis in sheep. PLoS One. 2020; 14(12):e0227061. PMC: 6938329. DOI: 10.1371/journal.pone.0227061. View

Stenfeldt C, Eschbaumer M, Rekant S, Pacheco J, Smoliga G, Hartwig E . The Foot-and-Mouth Disease Carrier State Divergence in Cattle. J Virol. 2016; 90(14):6344-64. PMC: 4936139. DOI: 10.1128/JVI.00388-16. View

10.

Stenfeldt C, Bertram M, Holinka-Patterson L, Fish I, Farooq U, Ahmed Z . Multiple Genomes of Foot-and-Mouth Disease Virus Serotype Asia-1 Obtained from Subclinically Infected Asian Buffalo (Bubalus bubalis) in Pakistan. Microbiol Resour Announc. 2022; 11(6):e0031122. PMC: 9202389. DOI: 10.1128/mra.00311-22. View

11.

Biswal J, Ranjan R, Subramaniam S, Mohapatra J, Patidar S, Sharma M . Genetic and antigenic variation of foot-and-mouth disease virus during persistent infection in naturally infected cattle and Asian buffalo in India. PLoS One. 2019; 14(6):e0214832. PMC: 6588224. DOI: 10.1371/journal.pone.0214832. View

12.

Stenfeldt C, Hartwig E, Smoliga G, Palinski R, Silva E, Bertram M . Contact Challenge of Cattle with Foot-and-Mouth Disease Virus Validates the Role of the Nasopharyngeal Epithelium as the Site of Primary and Persistent Infection. mSphere. 2018; 3(6). PMC: 6291620. DOI: 10.1128/mSphere.00493-18. View

13.

Jamal S, Ferrari G, Ahmed S, Normann P, Belsham G . Molecular characterization of serotype Asia-1 foot-and-mouth disease viruses in Pakistan and Afghanistan; emergence of a new genetic Group and evidence for a novel recombinant virus. Infect Genet Evol. 2011; 11(8):2049-62. DOI: 10.1016/j.meegid.2011.09.015. View

14.

Bertram M, Stenfeldt C, Holinka-Patterson L, Fish I, Farooq U, Ahmed Z . Multiple Genome Sequences of Foot-and-Mouth Disease Virus Asia-1 Lineage Sindh-08 from Outbreaks in Pakistan, 2011 to 2012. Microbiol Resour Announc. 2022; 11(6):e0031222. PMC: 9202380. DOI: 10.1128/mra.00312-22. View

15.

Farooq U, Ahmed Z, Naeem K, Bertram M, Brito B, Stenfeldt C . Characterization of naturally occurring, new and persistent subclinical foot-and-mouth disease virus infection in vaccinated Asian buffalo in Islamabad Capital Territory, Pakistan. Transbound Emerg Dis. 2018; 65(6):1836-1850. DOI: 10.1111/tbed.12963. View

16.

Knight-Jones T, Rushton J . The economic impacts of foot and mouth disease - what are they, how big are they and where do they occur?. Prev Vet Med. 2013; 112(3-4):161-73. PMC: 3989032. DOI: 10.1016/j.prevetmed.2013.07.013. View

17.

Sutmoller P, Gaggero A . Foot-and mouth diseases carriers. Vet Rec. 1965; 77(33):968-9. DOI: 10.1136/vr.77.33.968. View

18.

Pacheco J, Arzt J, Rodriguez L . Early events in the pathogenesis of foot-and-mouth disease in cattle after controlled aerosol exposure. Vet J. 2008; 183(1):46-53. DOI: 10.1016/j.tvjl.2008.08.023. View

19.

Logan G, Freimanis G, King D, Valdazo-Gonzalez B, Bachanek-Bankowska K, Sanderson N . A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq. BMC Genomics. 2014; 15:828. PMC: 4247156. DOI: 10.1186/1471-2164-15-828. View