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First Report of Complete Mitochondrial Genome in the Tribes Coomaniellini and Dicercini (Coleoptera: Buprestidae) and Phylogenetic Implications

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Journal Genes (Basel)
Publisher MDPI
Date 2022 Jun 24
PMID 35741836
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Abstract

The complete mitochondrial genomes (mitogenomes) of the tribes Coomaniellini and Dicercini were sequenced and described in this study, including (16,196 bp), (16,179 bp), and (16,276 bp). These complete mitogenomes are very similar in length and encoded 37 typical mitochondrial genes, including 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs) and 13 protein-coding genes (PCGs). Most of PCGs had typical ATN start codons and terminated with TAR. Among these mitogenomes, Leu2 (L2), Ile (I), Ser2 (S2), and Phe (F) were the four most frequently encoded amino acids. Moreover, phylogenetic analyses were performed based on three kinds of nucleotide matrixes (13 PCGs, 2 rRNAs, and 13 PCGs + 2 rRNAs) among the available sequenced species of the family Buprestidae using Bayesian inference and Maximum-likelihood methods. The results showed that a Chrysochroninae species interspersed in Buprestinae, and Coomaniellini is more closely related to Dicercini than Melanophilini. Moreover, the clade of Buprestidae was well separated from outgroups and the monophyly of Agrilinae is confirmed again. Our whole mitogenome phylogenetic results support that the genus can be transferred from Chrysochroinae to Buprestinae; whether Dicercini can be completely transferred remains to be further verified after enriching samples. Our results have produced new complete mitogenomic data, which will provide information for future phylogenetic and taxonomic research.

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References
1.
Horton D, McElhinney L, Freuling C, Marston D, Banyard A, Goharrriz H . Complex epidemiology of a zoonotic disease in a culturally diverse region: phylogeography of rabies virus in the Middle East. PLoS Negl Trop Dis. 2015; 9(3):e0003569. PMC: 4374968. DOI: 10.1371/journal.pntd.0003569. View

2.
Yang F, Du Y, Cao J, Huang F . Analysis of three leafminers' complete mitochondrial genomes. Gene. 2013; 529(1):1-6. DOI: 10.1016/j.gene.2013.08.010. View

3.
Boore J . Animal mitochondrial genomes. Nucleic Acids Res. 1999; 27(8):1767-80. PMC: 148383. DOI: 10.1093/nar/27.8.1767. View

4.
Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S . Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics. 2012; 28(12):1647-9. PMC: 3371832. DOI: 10.1093/bioinformatics/bts199. View

5.
Li R, Shu X, Li X, Meng L, Li B . Comparative mitogenome analysis of three species and monophyletic inference of Catantopinae (Orthoptera: Acridoidea). Genomics. 2018; 111(6):1728-1735. DOI: 10.1016/j.ygeno.2018.11.027. View