» Articles » PMID: 35707780

Nucleotide Sequence Sharing Between the Human Genome and Primers for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Detection

Overview
Journal Glob Med Genet
Publisher Thieme
Date 2022 Jun 16
PMID 35707780
Authors
Affiliations
Soon will be listed here.
Abstract

This study shows that oligonucleotide sequences are shared between the human genome and primers that have been proposed/used for SARS-CoV-2 detection by polymerase chain reaction (PCR). The high level of sharing (namely, up to 19mer with a maximum number of gaps equal to 2) might bear implications for the diagnostic validity of SARS-CoV-2 detection by PCR.

Citing Articles

SARS-CoV-2: The Self-Nonself Issue and Diagnostic Tests.

Kanduc D J Lab Physicians. 2023; 15(1):56-61.

PMID: 37064977 PMC: 10104719. DOI: 10.1055/s-0042-1750078.

References
1.
Gadkar V, Goldfarb D, Young V, Watson N, Al-Rawahi G, Srigley J . Development and validation of a new triplex real-time quantitative reverse Transcriptase-PCR assay for the clinical detection of SARS-CoV-2. Mol Cell Probes. 2021; 58:101744. PMC: 8176879. DOI: 10.1016/j.mcp.2021.101744. View

2.
Kanduc D . Thromboses and Hemostasis Disorders Associated with COVID-19: The Possible Causal Role of Cross-Reactivity and Immunological Imprinting. Glob Med Genet. 2021; 8(4):162-170. PMC: 8635820. DOI: 10.1055/s-0041-1731068. View

3.
Dayama P, Sampath K . Dengue disease outbreak detection. Stud Health Technol Inform. 2014; 205:1105-9. View

4.
Boratyn G, Thierry-Mieg J, Thierry-Mieg D, Busby B, Madden T . Magic-BLAST, an accurate RNA-seq aligner for long and short reads. BMC Bioinformatics. 2019; 20(1):405. PMC: 6659269. DOI: 10.1186/s12859-019-2996-x. View

5.
Wu D, Wu T, Liu Q, Yang Z . The SARS-CoV-2 outbreak: What we know. Int J Infect Dis. 2020; 94:44-48. PMC: 7102543. DOI: 10.1016/j.ijid.2020.03.004. View