» Articles » PMID: 35582545

Application of Principal Component Analysis (PCA) to the Evaluation and Screening of Multiactivity Fungi

Overview
Date 2022 May 18
PMID 35582545
Authors
Affiliations
Soon will be listed here.
Abstract

Continued innovation in screening methodologies remains important for the discovery of high-quality multiactive fungi, which have been of great significance to the development of new drugs. Mangrove-derived fungi, which are well recognized as prolific sources of natural products, are worth sustained attention and further study. In this study, 118 fungi, which mainly included spp. (34.62%) and spp. (15.38%), were isolated from the mangrove ecosystem of the Maowei Sea, and 83.1% of the cultured fungi showed at least one bioactivity in four antibacterial and three antioxidant assays. To accurately evaluate the fungal bioactivities, the fungi with multiple bioactivities were successfully evaluated and screened by principal component analysis (PCA), and this analysis provided a dataset for comparing and selecting multibioactive fungi. Among the 118 mangrove-derived fungi tested in this study, spp. showed the best comprehensive activity. Fungi such as and , which exhibited high comprehensive bioactivity as determined by the PCA, have great potential in the exploitation of natural products and the development of new drugs. This study demonstrated the first use of PCA as a time-saving, scientific method with a strong ability to evaluate and screen multiactive fungi, which indicated that this method can affect the discovery and development of new drugs.

Citing Articles

Genome-Scale Metabolic Models in Fungal Pathogens: Past, Present, and Future.

Fonseca-Fernandez A, Gonzalez Barrios A, Ramirez A Int J Mol Sci. 2024; 25(19).

PMID: 39409179 PMC: 11476900. DOI: 10.3390/ijms251910852.

References
1.
Huband M, Bradford P, Otterson L, Basarab G, Kutschke A, Giacobbe R . In vitro antibacterial activity of AZD0914, a new spiropyrimidinetrione DNA gyrase/topoisomerase inhibitor with potent activity against Gram-positive, fastidious Gram-Negative, and atypical bacteria. Antimicrob Agents Chemother. 2014; 59(1):467-74. PMC: 4291388. DOI: 10.1128/AAC.04124-14. View

2.
El-Sayed A . Purification and characterization of a new L-methioninase from solid cultures of Aspergillus flavipes. J Microbiol. 2011; 49(1):130-40. DOI: 10.1007/s12275-011-0259-2. View

3.
Atiphasaworn P, Monggoot S, Gentekaki E, Brooks S, Pripdeevech P . Antibacterial and Antioxidant Constituents of Extracts of Endophytic Fungi Isolated from Ocimum basilicum var. thyrsiflora Leaves. Curr Microbiol. 2017; 74(10):1185-1193. DOI: 10.1007/s00284-017-1303-1. View

4.
He Y, Wang B, Chen W, Cox R, He J, Chen F . Recent advances in reconstructing microbial secondary metabolites biosynthesis in Aspergillus spp. Biotechnol Adv. 2018; 36(3):739-783. DOI: 10.1016/j.biotechadv.2018.02.001. View

5.
Zhang L, Niaz S, Khan D, Wang Z, Zhu Y, Zhou H . Induction of Diverse Bioactive Secondary Metabolites from the Mangrove Endophytic Fungus Trichoderma sp. (Strain 307) by Co-Cultivation with Acinetobacter johnsonii (Strain B2). Mar Drugs. 2017; 15(2). PMC: 5334615. DOI: 10.3390/md15020035. View