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Clinical Significance and Immune Landscape of a Pyroptosis-Derived LncRNA Signature for Glioblastoma

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Specialty Cell Biology
Date 2022 Feb 28
PMID 35223836
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Abstract

Pyroptosis was recently implicated in the initiation and progression of tumors, including glioblastoma (GBM). This study aimed to explore the clinical significance of pyroptosis-related lncRNAs (PRLs) in GBM. Three independent cohorts were retrieved from the TCGA and CGGA databases. The consensus clustering and weighted gene coexpression network analysis (WGCNA) were applied to identify PRLs. The LASSO algorithm was employed to develop and validate a pyroptosis-related lncRNA signature (PRLS) in three independent cohorts. The molecular characteristics, clinical significances, tumor microenvironment, immune checkpoints profiles, and benefits of chemotherapy and immunotherapy regarding to PRLS were also explored. In the WGCNA framework, a key module that highly correlated with pyroptosis was extracted for identifying PRLs. Univariate Cox analysis further revealed the associations between PRLs and overall survival. Based on the expression profiles of PRLs, the PRLS was initially developed in TCGA cohort ( = 143) and then validated in two CGGA cohorts ( = 374). Multivariate Cox analysis demonstrated that our PRLS model was an independent risk factor. More importantly, this signature displayed a stable and accurate performance in predicting prognosis at 1, 3, and 5 years, with all AUCs above 0.7. The decision curve analysis also indicated that our signature had promising clinical application. In addition, patients with high PRLS score suggested a more abundant immune infiltration, higher expression of immune checkpoint genes, and better response to immunotherapy but worse to chemotherapy. A novel pyroptosis-related lncRNA signature with a robust performance was constructed and validated in multiple cohorts. This signature provided new perspectives for clinical management and precise treatments of GBM.

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References
1.
Wang W, Wu F, Zhao Z, Wang K, Huang R, Wang H . Long noncoding RNA LINC00152 is a potential prognostic biomarker in patients with high-grade glioma. CNS Neurosci Ther. 2018; 24(10):957-966. PMC: 6489806. DOI: 10.1111/cns.12850. View

2.
Liu Z, Wang L, Liu L, Lu T, Jiao D, Sun Y . The Identification and Validation of Two Heterogenous Subtypes and a Risk Signature Based on Ferroptosis in Hepatocellular Carcinoma. Front Oncol. 2021; 11:619242. PMC: 7961086. DOI: 10.3389/fonc.2021.619242. View

3.
Liu R, Yang F, Yin J, Liu Y, Zhang W, Zhou H . Influence of Tumor Immune Infiltration on Immune Checkpoint Inhibitor Therapeutic Efficacy: A Computational Retrospective Study. Front Immunol. 2021; 12:685370. PMC: 8248490. DOI: 10.3389/fimmu.2021.685370. View

4.
Kong Y, Feng Z, Chen A, Qi Q, Han M, Wang S . The Natural Flavonoid Galangin Elicits Apoptosis, Pyroptosis, and Autophagy in Glioblastoma. Front Oncol. 2019; 9:942. PMC: 6776614. DOI: 10.3389/fonc.2019.00942. View

5.
Rynkeviciene R, Simiene J, Strainiene E, Stankevicius V, Usinskiene J, Kaubriene E . Non-Coding RNAs in Glioma. Cancers (Basel). 2018; 11(1). PMC: 6356972. DOI: 10.3390/cancers11010017. View