» Articles » PMID: 35100413

Cryo-EM Structure of the Ancient Eukaryotic Ribosome from the Human Parasite Giardia Lamblia

Abstract

Giardiasis is a disease caused by the protist Giardia lamblia. As no human vaccines have been approved so far against it, and resistance to current drugs is spreading, new strategies for combating giardiasis need to be developed. The G. lamblia ribosome may provide a promising therapeutic target due to its distinct sequence differences from ribosomes of most eukaryotes and prokaryotes. Here, we report the cryo-electron microscopy structure of the G. lamblia (WB strain) ribosome determined at 2.75 Å resolution. The ribosomal RNA is the shortest known among eukaryotes, and lacks nearly all the eukaryote-specific ribosomal RNA expansion segments. In contrast, the ribosomal proteins are typically eukaryotic with some species-specific insertions/extensions. Most typical inter-subunit bridges are maintained except for one missing contact site. Unique structural features are located mainly at the ribosome's periphery. These may be exploited as target sites for the design of new compounds that inhibit selectively the parasite's ribosomal activity.

Citing Articles

Reduction of Ribosomal Expansion Segments in Yeast Species of the Magnusiomyces/Saprochaete Clade.

Brazdovic F, Brejova B, Sivakova B, Barath P, Kerak F, Hodorova V Genome Biol Evol. 2024; 16(8).

PMID: 39119893 PMC: 11342254. DOI: 10.1093/gbe/evae173.


Structure of an internal loop motif with three consecutive U•U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV-2 genomic RNA.

Vogele J, Duchardt-Ferner E, Bains J, Knezic B, Wacker A, Sich C Nucleic Acids Res. 2024; 52(11):6687-6706.

PMID: 38783391 PMC: 11194097. DOI: 10.1093/nar/gkae349.


Exploration of small nucleolar RNAs (snoRNAs) and their possible microRNA derivatives.

Lagunas-Rangel F Parasitology. 2024; 151(6):539-545.

PMID: 38767317 PMC: 11427974. DOI: 10.1017/S003118202400060X.


Cryo-EM structure of wheat ribosome reveals unique features of the plant ribosomes.

Mishra R, Sharma P, Khaja F, Uday A, Hussain T Structure. 2024; 32(5):562-574.e3.

PMID: 38458197 PMC: 7616111. DOI: 10.1016/j.str.2024.02.006.


The Giardia lamblia ribosome structure reveals divergence in several biological pathways and the mode of emetine function.

Eiler D, Wimberly B, Bilodeau D, Taliaferro J, Reigan P, Rissland O Structure. 2024; 32(4):400-410.e4.

PMID: 38242118 PMC: 10997490. DOI: 10.1016/j.str.2023.12.015.


References
1.
Adam R . Biology of Giardia lamblia. Clin Microbiol Rev. 2001; 14(3):447-75. PMC: 88984. DOI: 10.1128/CMR.14.3.447-475.2001. View

2.
Ramesh M, Woolford Jr J . Eukaryote-specific rRNA expansion segments function in ribosome biogenesis. RNA. 2016; 22(8):1153-62. PMC: 4931108. DOI: 10.1261/rna.056705.116. View

3.
Petri W . Treatment of Giardiasis. Curr Treat Options Gastroenterol. 2004; 8(1):13-17. DOI: 10.1007/s11938-005-0047-3. View

4.
Feng J, Yang C, Tian H, Wang J, Wen J . Identification and evolutionary analysis of the nucleolar proteome of Giardia lamblia. BMC Genomics. 2020; 21(1):269. PMC: 7104513. DOI: 10.1186/s12864-020-6679-9. View

5.
Pettersen E, Goddard T, Huang C, Meng E, Couch G, Croll T . UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein Sci. 2020; 30(1):70-82. PMC: 7737788. DOI: 10.1002/pro.3943. View