» Articles » PMID: 34178993

The MicroRNA Family Gets Wider: The IsomiRs Classification and Role

Overview
Specialty Cell Biology
Date 2021 Jun 28
PMID 34178993
Citations 50
Authors
Affiliations
Soon will be listed here.
Abstract

MicroRNAs (miRNAs or miRs) are the most characterized class of non-coding RNAs and are engaged in many cellular processes, including cell differentiation, development, and homeostasis. MicroRNA dysregulation was observed in several diseases, cancer included. Epitranscriptomics is a branch of epigenomics that embraces all RNA modifications occurring after DNA transcription and RNA synthesis and involving coding and non-coding RNAs. The development of new high-throughput technologies, especially deep RNA sequencing, has facilitated the discovery of miRNA isoforms (named isomiRs) resulting from RNA modifications mediated by enzymes, such as deaminases and exonucleases, and differing from the canonical ones in length, sequence, or both. In this review, we summarize the distinct classes of isomiRs, their regulation and biogenesis, and the active role of these newly discovered molecules in cancer and other diseases.

Citing Articles

Combinatorial Analysis of miRNAs and tRNA Fragments as Potential Biomarkers for Cancer Patients in Liquid Biopsies.

Glogovitis I, DAmbrosi S, Antunes-Ferreira M, Chiogna M, Yahubyan G, Baev V Noncoding RNA. 2025; 11(1).

PMID: 39997617 PMC: 11858735. DOI: 10.3390/ncrna11010017.


The Role of MicroRNAs in Liver Functioning: from Biogenesis to Therapeutic Approaches (Review).

Kozlov D, Rodimova S, Kuznetsova D Sovrem Tekhnologii Med. 2025; 15(5):54-79.

PMID: 39967915 PMC: 11832066. DOI: 10.17691/stm2023.15.5.06.


Comprehensive profiling of small RNAs and their changes and linkages to mRNAs in schizophrenia and bipolar disorder.

Nersisyan S, Loher P, Nazeraj I, Shao Z, Fullard J, Voloudakis G bioRxiv. 2025; .

PMID: 39763727 PMC: 11703252. DOI: 10.1101/2024.12.24.630254.


ncRNA Editing: Functional Characterization and Computational Resources.

Marceca G, Romano G, Acunzo M, Nigita G Methods Mol Biol. 2024; 2883:455-495.

PMID: 39702721 DOI: 10.1007/978-1-0716-4290-0_20.


Distinct brain and lung endothelial miRNA/mRNA profiles after exposure to infected red blood cells.

Metwally N, Tauler M, Torabi H, Allweier J, Mohamed S, Bessemoulin M iScience. 2024; 27(11):111265.

PMID: 39569379 PMC: 11576406. DOI: 10.1016/j.isci.2024.111265.


References
1.
Berezikov E, van Tetering G, Verheul M, van de Belt J, Van Laake L, Vos J . Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. Genome Res. 2006; 16(10):1289-98. PMC: 1581438. DOI: 10.1101/gr.5159906. View

2.
Calin G, Ferracin M, Cimmino A, Di Leva G, Shimizu M, E Wojcik S . A MicroRNA signature associated with prognosis and progression in chronic lymphocytic leukemia. N Engl J Med. 2005; 353(17):1793-801. DOI: 10.1056/NEJMoa050995. View

3.
Ha M, Kim V . Regulation of microRNA biogenesis. Nat Rev Mol Cell Biol. 2014; 15(8):509-24. DOI: 10.1038/nrm3838. View

4.
Xu X, Wang Y, Mojumdar K, Zhou Z, Jeong K, Mangala L . A-to-I-edited miRNA-379-5p inhibits cancer cell proliferation through CD97-induced apoptosis. J Clin Invest. 2019; 129(12):5343-5356. PMC: 6877318. DOI: 10.1172/JCI123396. View

5.
Thornton J, Du P, Jing L, Sjekloca L, Lin S, Grossi E . Selective microRNA uridylation by Zcchc6 (TUT7) and Zcchc11 (TUT4). Nucleic Acids Res. 2014; 42(18):11777-91. PMC: 4191393. DOI: 10.1093/nar/gku805. View