» Articles » PMID: 3399380

Comparisons of Ape and Human Sequences That Regulate Mitochondrial DNA Transcription and D-loop DNA Synthesis

Overview
Specialty Biochemistry
Date 1988 Jul 11
PMID 3399380
Citations 35
Authors
Affiliations
Soon will be listed here.
Abstract

The mitochondrial DNA (mtDNA) control regions for common chimpanzee, pygmy chimpanzee and gorilla were sequenced and the lengths and termini of their D-loop DNA's characterized. In these and all other species for which there are data, 5' termini map to sequences that contain the trinucleotide YAY. 3' termini are 25-51 nucleotides downstream from a sequence that is moderately conserved among vertebrates. Substitutions were greater than 1.5 times more frequent in the control region than in regions encoding structural genes. Additions and deletions were also frequent, especially in gorilla. Sequences of promoters and of two of four transcription factor binding sites were highly conserved. Comparisons of sequence similarity and transition/transversion ratios suggest that human and chimpanzees may be more closely related to each other than either is to gorilla, if substitution rates are approximately equal among these species.

Citing Articles

Mitogenome sequences of domestic cats demonstrate lineage expansions and dynamic mutation processes in a mitochondrial minisatellite.

Patterson E, Lall G, Neumann R, Ottolini B, Batini C, Sacchini F BMC Genomics. 2023; 24(1):690.

PMID: 37978434 PMC: 10655372. DOI: 10.1186/s12864-023-09789-1.


Indian Red Jungle fowl reveals a genetic relationship with South East Asian Red Jungle fowl and Indian native chicken breeds as evidenced through whole mitochondrial genome sequences.

Kanakachari M, Chatterjee R, Reddy M, Dange M, Bhattacharya T Front Genet. 2023; 14:1083976.

PMID: 37621706 PMC: 10445952. DOI: 10.3389/fgene.2023.1083976.


Comparative mitogenomics and phylogenetics of the family Carangidae with special emphasis on the mitogenome of the Indian Scad Decapterus russelli.

Jose A, Sukumaran S, Mukundan L, Raj N, Mary S, Nisha K Sci Rep. 2022; 12(1):5642.

PMID: 35379869 PMC: 8980026. DOI: 10.1038/s41598-022-09636-5.


Mitochondrial genomes of African pangolins and insights into evolutionary patterns and phylogeny of the family Manidae.

Du Toit Z, Du Plessis M, Dalton D, Jansen R, Grobler J, Kotze A BMC Genomics. 2017; 18(1):746.

PMID: 28934931 PMC: 5609056. DOI: 10.1186/s12864-017-4140-5.


The complete mitochondrial genome of Aspiorhynchus laticeps and its phylogenetic analysis.

Jiang M, Yang C, Wen H Meta Gene. 2015; 2:218-25.

PMID: 25606405 PMC: 4287850. DOI: 10.1016/j.mgene.2014.01.006.


References
1.
Streisinger G, Okada Y, Emrich J, Newton J, Tsugita A, Terzaghi E . Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday. Cold Spring Harb Symp Quant Biol. 1966; 31:77-84. DOI: 10.1101/sqb.1966.031.01.014. View

2.
Brun G . Mapping at the nucleotide level of Xenopus laevis mitochondrial D-loop H strand: structural features of the 3' region. Biochem Int. 1987; 14(4):643-57. View

3.
SANGER F, Air G, Barrell B, Brown N, Coulson A, Fiddes C . Nucleotide sequence of bacteriophage phi X174 DNA. Nature. 1977; 265(5596):687-95. DOI: 10.1038/265687a0. View

4.
Upholt W, Dawid I . Mapping of mitochondrial DNA of individual sheep and goats: rapid evolution in the D loop region. Cell. 1977; 11(3):571-83. DOI: 10.1016/0092-8674(77)90075-7. View

5.
SANGER F, Nicklen S, Coulson A . DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A. 1977; 74(12):5463-7. PMC: 431765. DOI: 10.1073/pnas.74.12.5463. View