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Cofactor F420: an Expanded View of Its Distribution, Biosynthesis and Roles in Bacteria and Archaea

Overview
Specialty Microbiology
Date 2021 Apr 14
PMID 33851978
Citations 9
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Abstract

Many bacteria and archaea produce the redox cofactor F420. F420 is structurally similar to the cofactors FAD and FMN but is catalytically more similar to NAD and NADP. These properties allow F420 to catalyze challenging redox reactions, including key steps in methanogenesis, antibiotic biosynthesis and xenobiotic biodegradation. In the last 5 years, there has been much progress in understanding its distribution, biosynthesis, role and applications. Whereas F420 was previously thought to be confined to Actinobacteria and Euryarchaeota, new evidence indicates it is synthesized across the bacterial and archaeal domains, as a result of extensive horizontal and vertical biosynthetic gene transfer. F420 was thought to be synthesized through one biosynthetic pathway; however, recent advances have revealed variants of this pathway and have resolved their key biosynthetic steps. In parallel, new F420-dependent biosynthetic and metabolic processes have been discovered. These advances have enabled the heterologous production of F420 and identified enantioselective F420H2-dependent reductases for biocatalysis. New research has also helped resolve how microorganisms use F420 to influence human and environmental health, providing opportunities for tuberculosis treatment and methane mitigation. A total of 50 years since its discovery, multiple paradigms associated with F420 have shifted, and new F420-dependent organisms and processes continue to be discovered.

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References
1.
Li W, Khullar A, Chou S, Sacramo A, Gerratana B . Biosynthesis of sibiromycin, a potent antitumor antibiotic. Appl Environ Microbiol. 2009; 75(9):2869-78. PMC: 2681668. DOI: 10.1128/AEM.02326-08. View

2.
Sorokin D, Makarova K, Abbas B, Ferrer M, Golyshin P, Galinski E . Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis. Nat Microbiol. 2017; 2:17081. PMC: 5494993. DOI: 10.1038/nmicrobiol.2017.81. View

3.
Decamps L, Philmus B, Benjdia A, White R, Begley T, Berteau O . Biosynthesis of F0, precursor of the F420 cofactor, requires a unique two radical-SAM domain enzyme and tyrosine as substrate. J Am Chem Soc. 2012; 134(44):18173-6. DOI: 10.1021/ja307762b. View

4.
Shi J, Xu X, Liu P, Hu Y, Zhang B, Jiao R . Discovery and biosynthesis of guanipiperazine from a NRPS-like pathway. Chem Sci. 2021; 12(8):2925-2930. PMC: 8179380. DOI: 10.1039/d0sc06135b. View

5.
Sousa F, Neukirchen S, Allen J, Lane N, Martin W . Lokiarchaeon is hydrogen dependent. Nat Microbiol. 2016; 1:16034. DOI: 10.1038/nmicrobiol.2016.34. View