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Recruitment of Archaeal DTD is a Key Event Toward the Emergence of Land Plants

Overview
Journal Sci Adv
Specialties Biology
Science
Date 2021 Feb 4
PMID 33536220
Citations 5
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Abstract

Streptophyte algae emerged as a land plant with adaptations that eventually led to terrestrialization. Land plants encounter a range of biotic and abiotic stresses that elicit anaerobic stress responses. Here, we show that acetaldehyde, a toxic metabolite of anaerobic stress, targets and generates ethyl adducts on aminoacyl-tRNA, a central component of the translation machinery. However, elongation factor thermo unstable (EF-Tu) safeguards l-aminoacyl-tRNA, but not d-aminoacyl-tRNA, from being modified by acetaldehyde. We identified a unique activity of archaeal-derived chiral proofreading module, d-aminoacyl-tRNA deacylase 2 (DTD2), that removes -ethyl adducts formed on d-aminoacyl-tRNAs (NEDATs). Thus, the study provides the molecular basis of ethanol and acetaldehyde hypersensitivity in DTD2 knockout plants. We uncovered an important gene transfer event from methanogenic archaea to the ancestor of land plants. While missing in other algal lineages, DTD2 is conserved from streptophyte algae to land plants, suggesting its role toward the emergence and evolution of land plants.

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References
1.
Drew M . OXYGEN DEFICIENCY AND ROOT METABOLISM: Injury and Acclimation Under Hypoxia and Anoxia. Annu Rev Plant Physiol Plant Mol Biol. 1997; 48:223-250. DOI: 10.1146/annurev.arplant.48.1.223. View

2.
Katoh K, Standley D . MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 2013; 30(4):772-80. PMC: 3603318. DOI: 10.1093/molbev/mst010. View

3.
Hodskinson M, Bolner A, Sato K, Kamimae-Lanning A, Rooijers K, Witte M . Alcohol-derived DNA crosslinks are repaired by two distinct mechanisms. Nature. 2020; 579(7800):603-608. PMC: 7116288. DOI: 10.1038/s41586-020-2059-5. View

4.
Yamane T, Miller D, Hopfield J . Discrimination between D- and L-tyrosyl transfer ribonucleic acids in peptide chain elongation. Biochemistry. 1981; 20(25):7059-64. DOI: 10.1021/bi00528a001. View

5.
Soutourina O, Soutourina J, Blanquet S, Plateau P . Formation of D-tyrosyl-tRNATyr accounts for the toxicity of D-tyrosine toward Escherichia coli. J Biol Chem. 2004; 279(41):42560-5. DOI: 10.1074/jbc.M402931200. View