Deep Learning in Deep Time

Overview

Journal Proc Natl Acad Sci U S A

Specialty Science

Date 2020 Nov 10

PMID 33168754

Authors

Alexander E White

Affiliations

Soon will be listed here.

References

Dunker S, Motivans E, Rakosy D, Boho D, Mader P, Hornick T . Pollen analysis using multispectral imaging flow cytometry and deep learning. New Phytol. 2020; 229(1):593-606. DOI: 10.1111/nph.16882. View

LeCun Y, Bengio Y, Hinton G . Deep learning. Nature. 2015; 521(7553):436-44. DOI: 10.1038/nature14539. View

Villon S, Mouillot D, Chaumont M, Subsol G, Claverie T, Villeger S . A new method to control error rates in automated species identification with deep learning algorithms. Sci Rep. 2020; 10(1):10972. PMC: 7334229. DOI: 10.1038/s41598-020-67573-7. View

Trisos C, Merow C, Pigot A . The projected timing of abrupt ecological disruption from climate change. Nature. 2020; 580(7804):496-501. DOI: 10.1038/s41586-020-2189-9. View

Nelson G, Ellis S . The history and impact of digitization and digital data mobilization on biodiversity research. Philos Trans R Soc Lond B Biol Sci. 2018; 374(1763). PMC: 6282090. DOI: 10.1098/rstb.2017.0391. View

Knope M, Bush A, Frishkoff L, Heim N, Payne J . Ecologically diverse clades dominate the oceans via extinction resistance. Science. 2020; 367(6481):1035-1038. DOI: 10.1126/science.aax6398. View

Romero I, Kong S, Fowlkes C, Jaramillo C, Urban M, Oboh-Ikuenobe F . Improving the taxonomy of fossil pollen using convolutional neural networks and superresolution microscopy. Proc Natl Acad Sci U S A. 2020; 117(45):28496-28505. PMC: 7668113. DOI: 10.1073/pnas.2007324117. View

Pigot A, Sheard C, Miller E, Bregman T, Freeman B, Roll U . Macroevolutionary convergence connects morphological form to ecological function in birds. Nat Ecol Evol. 2020; 4(2):230-239. DOI: 10.1038/s41559-019-1070-4. View

Wu S, Chang C, Mai G, Rubenstein D, Yang C, Huang Y . Artificial intelligence reveals environmental constraints on colour diversity in insects. Nat Commun. 2019; 10(1):4554. PMC: 6779759. DOI: 10.1038/s41467-019-12500-2. View

10.

Bengio Y, Courville A, Vincent P . Representation learning: a review and new perspectives. IEEE Trans Pattern Anal Mach Intell. 2013; 35(8):1798-828. DOI: 10.1109/TPAMI.2013.50. View

11.

Cohen U, Chung S, Lee D, Sompolinsky H . Separability and geometry of object manifolds in deep neural networks. Nat Commun. 2020; 11(1):746. PMC: 7005295. DOI: 10.1038/s41467-020-14578-5. View

12.

Sallan L, Friedman M, Sansom R, Bird C, Sansom I . The nearshore cradle of early vertebrate diversification. Science. 2018; 362(6413):460-464. DOI: 10.1126/science.aar3689. View