» Articles » PMID: 32529952

SARS-CoV-2 Nsp13, Nsp14, Nsp15 and Orf6 Function As Potent Interferon Antagonists

Overview
Date 2020 Jun 13
PMID 32529952
Citations 319
Authors
Affiliations
Soon will be listed here.
Abstract

The Coronavirus disease 2019 (COVID-19), which is caused by the novel SARS-CoV-2 virus, is now causing a tremendous global health concern. Since its first appearance in December 2019, the outbreak has already caused over 5.8 million infections worldwide (till 29 May 2020), with more than 0.35 million deaths. Early virus-mediated immune suppression is believed to be one of the unique characteristics of SARS-CoV-2 infection and contributes at least partially to the viral pathogenesis. In this study, we identified the key viral interferon antagonists of SARS-CoV-2 and compared them with two well-characterized SARS-CoV interferon antagonists, PLpro and orf6. Here we demonstrated that the SARS-CoV-2 nsp13, nsp14, nsp15 and orf6, but not the unique orf8, could potently suppress primary interferon production and interferon signalling. Although SARS-CoV PLpro has been well-characterized for its potent interferon-antagonizing, deubiquitinase and protease activities, SARS-CoV-2 PLpro, despite sharing high amino acid sequence similarity with SARS-CoV, loses both interferon-antagonising and deubiquitinase activities. Among the 27 viral proteins, SARS-CoV-2 orf6 demonstrated the strongest suppression on both primary interferon production and interferon signalling. Orf6-deleted SARS-CoV-2 may be considered for the development of intranasal live-but-attenuated vaccine against COVID-19.

Citing Articles

Anti-interferon armamentarium of human coronaviruses.

Khatun O, Kaur S, Tripathi S Cell Mol Life Sci. 2025; 82(1):116.

PMID: 40074984 PMC: 11904029. DOI: 10.1007/s00018-025-05605-z.


Examining the feasibility of replacing ORF3a with fluorescent genes to construct SARS-CoV-2 reporter viruses.

Webb I, Erdmann M, Milligan R, Savage M, Matthews D, Davidson A J Gen Virol. 2025; 106(2).

PMID: 39937571 PMC: 11822206. DOI: 10.1099/jgv.0.002072.


A comprehensive review of current insights into the virulence factors of SARS-CoV-2.

Wang Y, Xia B, Gao Z J Virol. 2025; 99(2):e0204924.

PMID: 39878471 PMC: 11852741. DOI: 10.1128/jvi.02049-24.


The coronavirus nsp14 exoribonuclease interface with the cofactor nsp10 is essential for efficient virus replication and enzymatic activity.

Grimes S, Heaton B, Anderson M, Burke K, Stevens L, Lu X J Virol. 2025; 99(2):e0170824.

PMID: 39791922 PMC: 11852845. DOI: 10.1128/jvi.01708-24.


Betacoronavirus internal protein: role in immune evasion and viral pathogenesis.

Gunawardene C, Wong L J Virol. 2025; 99(2):e0135324.

PMID: 39760492 PMC: 11852921. DOI: 10.1128/jvi.01353-24.


References
1.
Devaraj S, Wang N, Chen Z, Chen Z, Tseng M, Barretto N . Regulation of IRF-3-dependent innate immunity by the papain-like protease domain of the severe acute respiratory syndrome coronavirus. J Biol Chem. 2007; 282(44):32208-21. PMC: 2756044. DOI: 10.1074/jbc.M704870200. View

2.
Kim G, Kim M, Ra S, Lee J, Bae S, Jung J . Clinical characteristics of asymptomatic and symptomatic patients with mild COVID-19. Clin Microbiol Infect. 2020; 26(7):948.e1-948.e3. PMC: 7252018. DOI: 10.1016/j.cmi.2020.04.040. View

3.
Chan J, Kok K, Zhu Z, Chu H, To K, Yuan S . Genomic characterization of the 2019 novel human-pathogenic coronavirus isolated from a patient with atypical pneumonia after visiting Wuhan. Emerg Microbes Infect. 2020; 9(1):221-236. PMC: 7067204. DOI: 10.1080/22221751.2020.1719902. View

4.
Totura A, Baric R . SARS coronavirus pathogenesis: host innate immune responses and viral antagonism of interferon. Curr Opin Virol. 2012; 2(3):264-75. PMC: 7102726. DOI: 10.1016/j.coviro.2012.04.004. View

5.
Siu K, Kok K, Ng M, Poon V, Yuen K, Zheng B . Severe acute respiratory syndrome coronavirus M protein inhibits type I interferon production by impeding the formation of TRAF3.TANK.TBK1/IKKepsilon complex. J Biol Chem. 2009; 284(24):16202-16209. PMC: 2713514. DOI: 10.1074/jbc.M109.008227. View