» Articles » PMID: 32276051

Development of Reverse Transcription Loop-Mediated Isothermal Amplification Assays Targeting Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)

Overview
Journal J Mol Diagn
Publisher Elsevier
Date 2020 Apr 11
PMID 32276051
Citations 234
Authors
Affiliations
Soon will be listed here.
Abstract

The coronavirus disease 2019 (COVID-19) pandemic now has >2,000,000 confirmed cases worldwide. COVID-19 is currently diagnosed using quantitative RT-PCR methods, but the capacity of quantitative RT-PCR methods is limited by their requirement of high-level facilities and instruments. We developed and evaluated reverse transcription loop-mediated isothermal amplification (RT-LAMP) assays to detect genomic RNA of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative virus of COVID-19. RT-LAMP assays reported in this study can detect as low as 100 copies of SARS-CoV-2 RNA. Cross-reactivity of RT-LAMP assays to other human coronaviruses was not observed. A colorimetric detection method was adapted for this RT-LAMP assay to enable higher throughput.

Citing Articles

Structure-Guided design of Cas12a variants improves detection of nucleic acids.

Tong X, Li T, Zhang K, Zhao D, Zhang Y, Yin H Cell Insight. 2025; 4(2):100228.

PMID: 40061934 PMC: 11889556. DOI: 10.1016/j.cellin.2025.100228.


RUNCOV: a one-pot triplex real-time RT-LAMP as a point-of-care diagnostic tool for detecting SARS-CoV-2.

Robene I, Jouen E, Maillot-Lebon V, Fenelon B, Hascoat J, Pecrix Y Biol Methods Protoc. 2025; 10(1):bpaf010.

PMID: 40046730 PMC: 11882304. DOI: 10.1093/biomethods/bpaf010.


Advancements in LAMP-Based Diagnostics: Emerging Techniques and Applications in Viral Detection with a Focus on Herpesviruses in Transplant Patient Management.

Gomes Torres A, Mathias C, Baal S, Kohler A, Cunha M, Blanes L Int J Mol Sci. 2024; 25(21).

PMID: 39519059 PMC: 11546353. DOI: 10.3390/ijms252111506.


LAMP-CRISPR/Cas12a-based impedimetric biosensor powered by FeO@Au-(S-polyA-S)-Au for detection of SARS-CoV-2.

Rad M, Hakimian F, Mohebbi S, Yadegar A, Ghourchian H Mikrochim Acta. 2024; 191(11):644.

PMID: 39361061 DOI: 10.1007/s00604-024-06688-4.


RDAG U-Net: An Advanced AI Model for Efficient and Accurate CT Scan Analysis of SARS-CoV-2 Pneumonia Lesions.

Lee C, Pan C, Lee M, Wang C, Chang C, Shiue Y Diagnostics (Basel). 2024; 14(18).

PMID: 39335778 PMC: 11431783. DOI: 10.3390/diagnostics14182099.


References
1.
Khorosheva E, Karymov M, Selck D, Ismagilov R . Lack of correlation between reaction speed and analytical sensitivity in isothermal amplification reveals the value of digital methods for optimization: validation using digital real-time RT-LAMP. Nucleic Acids Res. 2015; 44(2):e10. PMC: 4737171. DOI: 10.1093/nar/gkv877. View

2.
Jung Y, Park G, Moon J, Ku K, Beak S, Lee C . Comparative Analysis of Primer-Probe Sets for RT-qPCR of COVID-19 Causative Virus (SARS-CoV-2). ACS Infect Dis. 2020; 6(9):2513-2523. DOI: 10.1021/acsinfecdis.0c00464. View

3.
Corman V, Eckerle I, Bleicker T, Zaki A, Landt O, Eschbach-Bludau M . Detection of a novel human coronavirus by real-time reverse-transcription polymerase chain reaction. Euro Surveill. 2012; 17(39). DOI: 10.2807/ese.17.39.20285-en. View

4.
Shirato K, Yano T, Senba S, Akachi S, Kobayashi T, Nishinaka T . Detection of Middle East respiratory syndrome coronavirus using reverse transcription loop-mediated isothermal amplification (RT-LAMP). Virol J. 2014; 11:139. PMC: 4132226. DOI: 10.1186/1743-422X-11-139. View

5.
Nie K, Qi S, Zhang Y, Luo L, Xie Y, Yang M . Evaluation of a direct reverse transcription loop-mediated isothermal amplification method without RNA extraction for the detection of human enterovirus 71 subgenotype C4 in nasopharyngeal swab specimens. PLoS One. 2012; 7(12):e52486. PMC: 3525532. DOI: 10.1371/journal.pone.0052486. View