» Articles » PMID: 31993203

Sp. Nov., Description and Genome Sequence of a New Member of the Genus Isolated from the Cecum of Feral Chicken

Overview
Publisher Elsevier
Date 2020 Jan 30
PMID 31993203
Citations 2
Authors
Affiliations
Soon will be listed here.
Abstract

An obligately anaerobic, non-motile, Gram-positive coccobacillus strain SW451 was isolated from pooled caecum contents of feral chickens. Based on taxono-genomic, and biochemical analyses, the strain SW451 represents a new species of the genus , for which the name sp. nov. is proposed. The type strain of is SW451 (=DSM 109473 = CCOS 1879).

Citing Articles

The Effects of Raw Material on Egg Quality, Serum Biochemistry, Gut Morphology and Gut Flora.

Li P, Yan Z, Shi P, Wang D, Liu Z, Lu M Antioxidants (Basel). 2023; 12(12).

PMID: 38136205 PMC: 10741118. DOI: 10.3390/antiox12122084.


SW178 sp. nov., an intestinal bacterium of feral chicken.

Wongkuna S, Ghimire S, Chankhamhaengdecha S, Janvilisri T, Scaria J PeerJ. 2021; 9:e11050.

PMID: 33986975 PMC: 8086573. DOI: 10.7717/peerj.11050.

References
1.
Lee I, Kim Y, Park S, Chun J . OrthoANI: An improved algorithm and software for calculating average nucleotide identity. Int J Syst Evol Microbiol. 2015; 66(2):1100-1103. DOI: 10.1099/ijsem.0.000760. View

2.
Amrane S, Hocquart M, Afouda P, Kuete E, Pham T, Dione N . Metagenomic and culturomic analysis of gut microbiota dysbiosis during Clostridium difficile infection. Sci Rep. 2019; 9(1):12807. PMC: 6728329. DOI: 10.1038/s41598-019-49189-8. View

3.
Felsenstein J . Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol. 1981; 17(6):368-76. DOI: 10.1007/BF01734359. View

4.
Wick R, Judd L, Gorrie C, Holt K . Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput Biol. 2017; 13(6):e1005595. PMC: 5481147. DOI: 10.1371/journal.pcbi.1005595. View

5.
Han G, Kim E, Lee J, Lee J, Jin G, Park J . Relationship between the microbiota in different sections of the gastrointestinal tract, and the body weight of broiler chickens. Springerplus. 2016; 5(1):911. PMC: 4927549. DOI: 10.1186/s40064-016-2604-8. View