» Articles » PMID: 31249367

Enzyme Activity and Structural Features of Three Single-domain Phloem Cyclophilins from Brassica Napus

Overview
Journal Sci Rep
Specialty Science
Date 2019 Jun 29
PMID 31249367
Citations 4
Authors
Affiliations
Soon will be listed here.
Abstract

Cyclophilins (CYPs) are a group of ubiquitous prolyl cis/trans isomerases (PPIases). It was shown that plants possess the most diverse CYP families and that these are abundant in the phloem long-distance translocation stream. Since phloem exudate showed PPIase activity, three single-domain CYPs that occur in phloem samples from Brassica napus were characterised on functional and structural levels. It could be shown that they exhibit isomerase activity and that this activity is controlled by a redox regulation mechanism, which has been postulated for divergent CYPs. The structure determination by small-angle X-ray scattering experiments revealed a conserved globular shape. In addition, the high-resolution crystal structure of BnCYP19-1 was resolved and refined to 2.0 Å resolution, and the active sites of related CYPs as well as substrate binding were modelled. The obtained data and results support the hypothesis that single domain phloem CYPs are active phloem PPIases that may function as chaperones.

Citing Articles

Characterization and regulation of salt upregulated cyclophilin from a halotolerant strain of Penicillium oxalicum.

Singh M, Singh H, Kaur K, Shubhankar S, Singh S, Kaur A Sci Rep. 2023; 13(1):17433.

PMID: 37833355 PMC: 10575979. DOI: 10.1038/s41598-023-44606-5.


The mRNA mobileome: challenges and opportunities for deciphering signals from the noise.

Heeney M, Frank M Plant Cell. 2023; 35(6):1817-1833.

PMID: 36881847 PMC: 10226602. DOI: 10.1093/plcell/koad063.


Cyclophilin anaCyp40 regulates photosystem assembly and phycobilisome association in a cyanobacterium.

Yadav S, Centola M, Glaesmann M, Pogoryelov D, Ladig R, Heilemann M Nat Commun. 2022; 13(1):1690.

PMID: 35354803 PMC: 8967839. DOI: 10.1038/s41467-022-29211-w.


Plant Cyclophilins: Multifaceted Proteins With Versatile Roles.

Singh H, Kaur K, Singh M, Kaur G, Singh P Front Plant Sci. 2020; 11:585212.

PMID: 33193535 PMC: 7641896. DOI: 10.3389/fpls.2020.585212.

References
1.
Franke D, Petoukhov M, Konarev P, Panjkovich A, Tuukkanen A, Mertens H . : a comprehensive data analysis suite for small-angle scattering from macromolecular solutions. J Appl Crystallogr. 2017; 50(Pt 4):1212-1225. PMC: 5541357. DOI: 10.1107/S1600576717007786. View

2.
Laxa M, Konig J, Dietz K, Kandlbinder A . Role of the cysteine residues in Arabidopsis thaliana cyclophilin CYP20-3 in peptidyl-prolyl cis-trans isomerase and redox-related functions. Biochem J. 2006; 401(1):287-97. PMC: 1698676. DOI: 10.1042/BJ20061092. View

3.
Ahn J, Kim D, You Y, Seok M, Park J, Hwang H . Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress. BMC Plant Biol. 2010; 10:253. PMC: 3012604. DOI: 10.1186/1471-2229-10-253. View

4.
Keedy D, Kenner L, Warkentin M, Woldeyes R, Hopkins J, Thompson M . Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography. Elife. 2015; 4. PMC: 4721965. DOI: 10.7554/eLife.07574. View

5.
Joosten R, Long F, Murshudov G, Perrakis A . The PDB_REDO server for macromolecular structure model optimization. IUCrJ. 2014; 1(Pt 4):213-20. PMC: 4107921. DOI: 10.1107/S2052252514009324. View