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Temperature Sensing Is Distributed Throughout the Regulatory Network That Controls FLC Epigenetic Silencing in Vernalization

Overview
Journal Cell Syst
Publisher Cell Press
Date 2018 Dec 4
PMID 30503646
Citations 24
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Abstract

Many organisms need to respond to complex, noisy environmental signals for developmental decision making. Here, we dissect how Arabidopsis plants integrate widely fluctuating field temperatures over month-long timescales to progressively upregulate VERNALIZATION INSENSITIVE3 (VIN3) and silence FLOWERING LOCUS C (FLC), aligning flowering with spring. We develop a mathematical model for vernalization that operates on multiple timescales-long term (month), short term (day), and current (hour)-and is constrained by experimental data. Our analysis demonstrates that temperature sensing is not localized to specific nodes within the FLC network. Instead, temperature sensing is broadly distributed, with each thermosensory process responding to specific features of the plants' history of exposure to warm and cold. The model accurately predicts FLC silencing in new field data, allowing us to forecast FLC expression in changing climates. We suggest that distributed thermosensing may be a general property of thermoresponsive regulatory networks in complex natural environments.

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References
1.
Bond D, Dennis E, Pogson B, Finnegan E . Histone acetylation, VERNALIZATION INSENSITIVE 3, FLOWERING LOCUS C, and the vernalization response. Mol Plant. 2009; 2(4):724-737. DOI: 10.1093/mp/ssp021. View

2.
Yang H, Berry S, Olsson T, Hartley M, Howard M, Dean C . Distinct phases of Polycomb silencing to hold epigenetic memory of cold in . Science. 2017; 357(6356):1142-1145. DOI: 10.1126/science.aan1121. View

3.
Helliwell C, Robertson M, Finnegan E, Buzas D, Dennis E . Vernalization-repression of Arabidopsis FLC requires promoter sequences but not antisense transcripts. PLoS One. 2011; 6(6):e21513. PMC: 3119698. DOI: 10.1371/journal.pone.0021513. View

4.
Angel A, Song J, Yang H, Questa J, Dean C, Howard M . Vernalizing cold is registered digitally at FLC. Proc Natl Acad Sci U S A. 2015; 112(13):4146-51. PMC: 4386389. DOI: 10.1073/pnas.1503100112. View

5.
Lee I, Amasino R . Effect of Vernalization, Photoperiod, and Light Quality on the Flowering Phenotype of Arabidopsis Plants Containing the FRIGIDA Gene. Plant Physiol. 1995; 108(1):157-162. PMC: 157316. DOI: 10.1104/pp.108.1.157. View