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Sequence Ion Structures and Dissociation Chemistry of Deprotonated Sucrose Anions

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Specialty Chemistry
Date 2018 Oct 5
PMID 30284205
Citations 3
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Abstract

We investigate the tandem mass spectrometry of regiospecifically labeled, deprotonated sucrose analytes. We utilize density functional theory calculations to model the pertinent gas-phase fragmentation chemistry of the prevalent glycosidic bond cleavages (B-Y and C-Z reactions) and compare these predictions to infrared spectroscopy experiments on the resulting B and C product anions. For the C anions, barriers to interconversion of the pyranose [α-glucose-H], C anions to entropically favorable ring-open aldehyde-terminated forms were modest (41 kJ mol) consistent with the observation of a band assigned to a carbonyl stretch at ~ 1680-1720 cm. For the B anions, our transition structure calculations predict the presence of both deprotonated 1,6-anhydroglucose and carbon 2-ketone ((4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)dihydro-2H-pyran-3(4H)-one) anion structures, with the latter predominating. This hypothesis is supported by our spectroscopic data which show diagnostic bands at 1600, 1674, and 1699 cm (deprotonated carbon 2-ketone structures), and at ~ 1541 cm (both types of structure) and RRKM rate calculations. The deprotonated carbon 2-ketone structures are also the lowest energy product B anions. Graphical Abstract ᅟ.

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References
1.
Harvey D . Fragmentation of negative ions from carbohydrates: part 1. Use of nitrate and other anionic adducts for the production of negative ion electrospray spectra from N-linked carbohydrates. J Am Soc Mass Spectrom. 2005; 16(5):622-30. DOI: 10.1016/j.jasms.2005.01.004. View

2.
Harvey D, Scarff C, Edgeworth M, Struwe W, Pagel K, Thalassinos K . Travelling-wave ion mobility and negative ion fragmentation of high-mannose N-glycans. J Mass Spectrom. 2016; 51(3):219-35. PMC: 4821469. DOI: 10.1002/jms.3738. View

3.
Pfenninger A, Karas M, Finke B, Stahl B . Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 1: methodology). J Am Soc Mass Spectrom. 2002; 13(11):1331-40. DOI: 10.1016/S1044-0305(02)00645-1. View

4.
Mucha E, Gonzalez Florez A, Marianski M, Thomas D, Hoffmann W, Struwe W . Glycan Fingerprinting via Cold-Ion Infrared Spectroscopy. Angew Chem Int Ed Engl. 2017; 56(37):11248-11251. DOI: 10.1002/anie.201702896. View

5.
Ashline D, Hanneman A, Zhang H, Reinhold V . Structural documentation of glycan epitopes: sequential mass spectrometry and spectral matching. J Am Soc Mass Spectrom. 2014; 25(3):444-53. PMC: 3950938. DOI: 10.1007/s13361-013-0776-9. View