» Articles » PMID: 30127404

Ancient DNA from Chalcolithic Israel Reveals the Role of Population Mixture in Cultural Transformation

Overview
Journal Nat Commun
Specialty Biology
Date 2018 Aug 22
PMID 30127404
Citations 41
Authors
Affiliations
Soon will be listed here.
Abstract

The material culture of the Late Chalcolithic period in the southern Levant (4500-3900/3800 BCE) is qualitatively distinct from previous and subsequent periods. Here, to test the hypothesis that the advent and decline of this culture was influenced by movements of people, we generated genome-wide ancient DNA from 22 individuals from Peqi'in Cave, Israel. These individuals were part of a homogeneous population that can be modeled as deriving ~57% of its ancestry from groups related to those of the local Levant Neolithic, ~17% from groups related to those of the Iran Chalcolithic, and ~26% from groups related to those of the Anatolian Neolithic. The Peqi'in population also appears to have contributed differently to later Bronze Age groups, one of which we show cannot plausibly have descended from the same population as that of Peqi'in Cave. These results provide an example of how population movements propelled cultural changes in the deep past.

Citing Articles

High continuity of forager ancestry in the Neolithic period of the eastern Maghreb.

Lipson M, Ringbauer H, Lucarini G, Aouadi N, Aoudia L, Belhouchet L Nature. 2025; .

PMID: 40074896 DOI: 10.1038/s41586-025-08699-4.


PANE: fast and reliable ancestral reconstruction on ancient genotype data with non-negative least square and principal component analysis.

de Gennaro L, Molinaro L, Raveane A, Santonastaso F, Saponetti S, Massi M Genome Biol. 2025; 26(1):29.

PMID: 39934833 PMC: 11818073. DOI: 10.1186/s13059-025-03491-z.


The genetic origin of the Indo-Europeans.

Lazaridis I, Patterson N, Anthony D, Vyazov L, Fournier R, Ringbauer H Nature. 2025; 639(8053):132-142.

PMID: 39910300 DOI: 10.1038/s41586-024-08531-5.


A genomic history of the North Pontic Region from the Neolithic to the Bronze Age.

Nikitin A, Lazaridis I, Patterson N, Ivanova S, Videiko M, Dergachev V Nature. 2025; 639(8053):124-131.

PMID: 39910299 PMC: 11909631. DOI: 10.1038/s41586-024-08372-2.


Patterns of population structure and genetic variation within the Saudi Arabian population.

Malomane D, Williams M, Huber C, Mangul S, Abedalthagafi M, Chiang C bioRxiv. 2025; .

PMID: 39868174 PMC: 11761371. DOI: 10.1101/2025.01.10.632500.


References
1.
Weissensteiner H, Pacher D, Kloss-Brandstatter A, Forer L, Specht G, Bandelt H . HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing. Nucleic Acids Res. 2016; 44(W1):W58-63. PMC: 4987869. DOI: 10.1093/nar/gkw233. View

2.
Korneliussen T, Albrechtsen A, Nielsen R . ANGSD: Analysis of Next Generation Sequencing Data. BMC Bioinformatics. 2014; 15:356. PMC: 4248462. DOI: 10.1186/s12859-014-0356-4. View

3.
Rohland N, Harney E, Mallick S, Nordenfelt S, Reich D . Partial uracil-DNA-glycosylase treatment for screening of ancient DNA. Philos Trans R Soc Lond B Biol Sci. 2014; 370(1660):20130624. PMC: 4275898. DOI: 10.1098/rstb.2013.0624. View

4.
Auton A, Brooks L, Durbin R, Garrison E, Kang H, Korbel J . A global reference for human genetic variation. Nature. 2015; 526(7571):68-74. PMC: 4750478. DOI: 10.1038/nature15393. View

5.
Patterson N, Price A, Reich D . Population structure and eigenanalysis. PLoS Genet. 2006; 2(12):e190. PMC: 1713260. DOI: 10.1371/journal.pgen.0020190. View