Phase-lags in Large Scale Brain Synchronization: Methodological Considerations and In-silico Analysis

Overview

Journal PLoS Comput Biol

Specialty Biology

Date 2018 Jul 11

PMID 29990339

Citations 31

Authors

Spase Petkoski

J Matias Palva

Viktor K Jirsa

Affiliations

Soon will be listed here.

Abstract

Trial Registration: South African Clinical Trials Register: http://www.sanctr.gov.za/SAClinicalbrnbspTrials/tabid/169/Default.aspx, then link to respiratory tract then link to tuberculosis, pulmonary; and TASK Applied Sciences Clinical Trials, AP-TB-201-16 (ALOPEXX): https://task.org.za/clinical-trials/.

Citing Articles

Phase-Dependent Response to Electrical Stimulation of Cortical Networks during Recurrent Epileptiform Short Discharge Generation In Vitro.

Chizhov A, Tiselko V, Postnikova T, Zaitsev A Int J Mol Sci. 2024; 25(15).

PMID: 39125856 PMC: 11313217. DOI: 10.3390/ijms25158287.

Pattern of frustration formation in the functional brain network.

Saberi M, Khosrowabadi R, Khatibi A, Misic B, Jafari G Netw Neurosci. 2024; 6(4):1334-1356.

PMID: 38800463 PMC: 11117102. DOI: 10.1162/netn_a_00268.

Human connectome topology directs cortical traveling waves and shapes frequency gradients.

Koller D, Schirner M, Ritter P Nat Commun. 2024; 15(1):3570.

PMID: 38670965 PMC: 11053146. DOI: 10.1038/s41467-024-47860-x.

Rhythmicity of neuronal oscillations delineates their cortical and spectral architecture.

Myrov V, Siebenhuhner F, Juvonen J, Arnulfo G, Palva S, Palva J Commun Biol. 2024; 7(1):405.

PMID: 38570628 PMC: 10991572. DOI: 10.1038/s42003-024-06083-y.

A phase-shifting anterior-posterior network organizes global phase relations.

Menceloglu M, Grabowecky M, Suzuki S PLoS One. 2024; 19(2):e0296827.

PMID: 38346024 PMC: 10861041. DOI: 10.1371/journal.pone.0296827.

References

Ghosh A, Rho Y, McIntosh A, Kotter R, Jirsa V . Noise during rest enables the exploration of the brain's dynamic repertoire. PLoS Comput Biol. 2008; 4(10):e1000196. PMC: 2551736. DOI: 10.1371/journal.pcbi.1000196. View

Cabral J, Luckhoo H, Woolrich M, Joensson M, Mohseni H, Baker A . Exploring mechanisms of spontaneous functional connectivity in MEG: how delayed network interactions lead to structured amplitude envelopes of band-pass filtered oscillations. Neuroimage. 2013; 90:423-35. DOI: 10.1016/j.neuroimage.2013.11.047. View

Jirsa V . Neural field dynamics with local and global connectivity and time delay. Philos Trans A Math Phys Eng Sci. 2009; 367(1891):1131-43. DOI: 10.1098/rsta.2008.0260. View

Vinck M, Oostenveld R, van Wingerden M, Battaglia F, Pennartz C . An improved index of phase-synchronization for electrophysiological data in the presence of volume-conduction, noise and sample-size bias. Neuroimage. 2011; 55(4):1548-65. DOI: 10.1016/j.neuroimage.2011.01.055. View

Stankovski T, Petkoski S, Raeder J, Smith A, McClintock P, Stefanovska A . Alterations in the coupling functions between cortical and cardio-respiratory oscillations due to anaesthesia with propofol and sevoflurane. Philos Trans A Math Phys Eng Sci. 2016; 374(2067). PMC: 4822446. DOI: 10.1098/rsta.2015.0186. View

Waxman S . Determinants of conduction velocity in myelinated nerve fibers. Muscle Nerve. 1980; 3(2):141-50. DOI: 10.1002/mus.880030207. View

Palva J, Palva S, Kaila K . Phase synchrony among neuronal oscillations in the human cortex. J Neurosci. 2005; 25(15):3962-72. PMC: 6724920. DOI: 10.1523/JNEUROSCI.4250-04.2005. View

Jirsa V, Muller V . Cross-frequency coupling in real and virtual brain networks. Front Comput Neurosci. 2013; 7:78. PMC: 3699761. DOI: 10.3389/fncom.2013.00078. View

Lee W, Ott E, Antonsen T . Large coupled oscillator systems with heterogeneous interaction delays. Phys Rev Lett. 2009; 103(4):044101. DOI: 10.1103/PhysRevLett.103.044101. View

10.

Cabral J, Hugues E, Sporns O, Deco G . Role of local network oscillations in resting-state functional connectivity. Neuroimage. 2011; 57(1):130-139. DOI: 10.1016/j.neuroimage.2011.04.010. View

11.

Fries P . A mechanism for cognitive dynamics: neuronal communication through neuronal coherence. Trends Cogn Sci. 2005; 9(10):474-80. DOI: 10.1016/j.tics.2005.08.011. View

12.

Stam C, van Straaten E . Go with the flow: use of a directed phase lag index (dPLI) to characterize patterns of phase relations in a large-scale model of brain dynamics. Neuroimage. 2012; 62(3):1415-28. DOI: 10.1016/j.neuroimage.2012.05.050. View

13.

Deco G, Ponce-Alvarez A, Mantini D, Luca Romani G, Hagmann P, Corbetta M . Resting-state functional connectivity emerges from structurally and dynamically shaped slow linear fluctuations. J Neurosci. 2013; 33(27):11239-52. PMC: 3718368. DOI: 10.1523/JNEUROSCI.1091-13.2013. View

14.

Lachaux J, Lutz A, Rudrauf D, Cosmelli D, Le Van Quyen M, Martinerie J . Estimating the time-course of coherence between single-trial brain signals: an introduction to wavelet coherence. Neurophysiol Clin. 2002; 32(3):157-74. DOI: 10.1016/s0987-7053(02)00301-5. View

15.

Proix T, Spiegler A, Schirner M, Rothmeier S, Ritter P, Jirsa V . How do parcellation size and short-range connectivity affect dynamics in large-scale brain network models?. Neuroimage. 2016; 142:135-149. DOI: 10.1016/j.neuroimage.2016.06.016. View

16.

Honey C, Sporns O . Dynamical consequences of lesions in cortical networks. Hum Brain Mapp. 2008; 29(7):802-9. PMC: 6870962. DOI: 10.1002/hbm.20579. View

17.

Ibanez-Molina A, Iglesias-Parro S . Neurocomputational Model of EEG Complexity during Mind Wandering. Front Comput Neurosci. 2016; 10:20. PMC: 4777878. DOI: 10.3389/fncom.2016.00020. View

18.

Sanz-Leon P, Knock S, Spiegler A, Jirsa V . Mathematical framework for large-scale brain network modeling in The Virtual Brain. Neuroimage. 2015; 111:385-430. DOI: 10.1016/j.neuroimage.2015.01.002. View

19.

Eguiluz V, Perez T, Borge-Holthoefer J, Arenas A . Structural and functional networks in complex systems with delay. Phys Rev E Stat Nonlin Soft Matter Phys. 2011; 83(5 Pt 2):056113. DOI: 10.1103/PhysRevE.83.056113. View

20.

Hagmann P, Cammoun L, Gigandet X, Gerhard S, Grant P, Wedeen V . MR connectomics: Principles and challenges. J Neurosci Methods. 2010; 194(1):34-45. DOI: 10.1016/j.jneumeth.2010.01.014. View