Modifying the Steric Properties in the Second Coordination Sphere of Designed Peptides Leads to Enhancement of Nitrite Reductase Activity
Overview
Authors
Affiliations
Protein design is a useful strategy to interrogate the protein structure-function relationship. We demonstrate using a highly modular 3-stranded coiled coil (TRI-peptide system) that a functional type 2 copper center exhibiting copper nitrite reductase (NiR) activity exhibits the highest homogeneous catalytic efficiency under aqueous conditions for the reduction of nitrite to NO and H O. Modification of the amino acids in the second coordination sphere of the copper center increases the nitrite reductase activity up to 75-fold compared to previously reported systems. We find also that steric bulk can be used to enforce a three-coordinate Cu in a site, which tends toward two-coordination with decreased steric bulk. This study demonstrates the importance of the second coordination sphere environment both for controlling metal-center ligation and enhancing the catalytic efficiency of metalloenzymes and their analogues.
Discussing the Terms Biomimetic and Bioinspired within Bioinorganic Chemistry.
Engbers S, van Langevelde P, Hetterscheid D, Klein J Inorg Chem. 2024; 63(43):20057-20067.
PMID: 39307983 PMC: 11523218. DOI: 10.1021/acs.inorgchem.4c01070.
Revving up a Designed Copper Nitrite Reductase Using Non-Coded Active Site Ligands.
Pitts W, Deb A, Penner-Hahn J, Pecoraro V ACS Catal. 2024; 14(6):4362-4368.
PMID: 39157175 PMC: 11329067. DOI: 10.1021/acscatal.3c06159.
Application of artificial backbone connectivity in the development of metalloenzyme mimics.
Wolfe J, Seth Horne W Curr Opin Chem Biol. 2024; 81:102509.
PMID: 39098212 PMC: 11345794. DOI: 10.1016/j.cbpa.2024.102509.
Van Stappen C, Deng Y, Liu Y, Heidari H, Wang J, Zhou Y Chem Rev. 2022; 122(14):11974-12045.
PMID: 35816578 PMC: 10199331. DOI: 10.1021/acs.chemrev.2c00106.
De novo metalloprotein design.
Chalkley M, Mann S, DeGrado W Nat Rev Chem. 2022; 6(1):31-50.
PMID: 35811759 PMC: 9264687. DOI: 10.1038/s41570-021-00339-5.