» Articles » PMID: 29186115

A Transfer-RNA-derived Small RNA Regulates Ribosome Biogenesis

Overview
Journal Nature
Specialty Science
Date 2017 Nov 30
PMID 29186115
Citations 278
Authors
Affiliations
Soon will be listed here.
Abstract

Transfer-RNA-derived small RNAs (tsRNAs; also called tRNA-derived fragments) are an abundant class of small non-coding RNAs whose biological roles are not well understood. Here we show that inhibition of a specific tsRNA, LeuCAG3'tsRNA, induces apoptosis in rapidly dividing cells in vitro and in a patient-derived orthotopic hepatocellular carcinoma model in mice. This tsRNA binds at least two ribosomal protein mRNAs (RPS28 and RPS15) to enhance their translation. A decrease in translation of RPS28 mRNA blocks pre-18S ribosomal RNA processing, resulting in a reduction in the number of 40S ribosomal subunits. These data establish a post-transcriptional mechanism that can fine-tune gene expression during different physiological states and provide a potential new target for treating cancer.

Citing Articles

The functions and modifications of tRNA-derived small RNAs in cancer biology.

Saad A, Zhang K, Deng Q, Zhou J, Ge L, Wang H Cancer Metastasis Rev. 2025; 44(1):38.

PMID: 40072687 DOI: 10.1007/s10555-025-10254-6.


New insights into tRNA-derived small RNAs in human digestive diseases.

Liu Y, Chen F, Zhang F, Ye Y, Su Y, Liu Y Mol Biol Rep. 2025; 52(1):295.

PMID: 40063289 DOI: 10.1007/s11033-025-10393-7.


The Role of tRNA-Derived Small RNAs (tsRNAs) in Regulating Cell Death of Cardiovascular Diseases.

Guo J, Chen X, Ren J, Wang Y, Wang K, Yang S Biology (Basel). 2025; 14(2).

PMID: 40001986 PMC: 11853139. DOI: 10.3390/biology14020218.


A novel 5'tRNA-derived fragment tRF-Tyr inhibits tumor progression by targeting hnRNPD in gastric cancer.

Cui H, Liu Z, Peng L, Liu L, Xie X, Zhang Y Cell Commun Signal. 2025; 23(1):88.

PMID: 39953522 PMC: 11829405. DOI: 10.1186/s12964-025-02086-2.


Free introns of tRNAs as complementarity-dependent regulators of gene expression.

Nostramo R, Sinopoli P, Bao A, Metcalf S, Peltier L, Hopper A Mol Cell. 2025; 85(4):726-741.e6.

PMID: 39938518 PMC: 11845289. DOI: 10.1016/j.molcel.2025.01.019.


References
1.
Oskarsson T, Trumpp A . The Myc trilogy: lord of RNA polymerases. Nat Cell Biol. 2005; 7(3):215-7. DOI: 10.1038/ncb0305-215. View

2.
Robledo S, Idol R, Crimmins D, Ladenson J, Mason P, Bessler M . The role of human ribosomal proteins in the maturation of rRNA and ribosome production. RNA. 2008; 14(9):1918-29. PMC: 2525958. DOI: 10.1261/rna.1132008. View

3.
Cozen A, Quartley E, Holmes A, Hrabeta-Robinson E, Phizicky E, Lowe T . ARM-seq: AlkB-facilitated RNA methylation sequencing reveals a complex landscape of modified tRNA fragments. Nat Methods. 2015; 12(9):879-84. PMC: 4553111. DOI: 10.1038/nmeth.3508. View

4.
Sharma U, Conine C, Shea J, Boskovic A, Derr A, Bing X . Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals. Science. 2016; 351(6271):391-396. PMC: 4888079. DOI: 10.1126/science.aad6780. View

5.
Maute R, Schneider C, Sumazin P, Holmes A, Califano A, Basso K . tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma. Proc Natl Acad Sci U S A. 2013; 110(4):1404-9. PMC: 3557069. DOI: 10.1073/pnas.1206761110. View