» Articles » PMID: 29158775

Evaluation of Microbial Globin Promoters for Oxygen-limited Processes Using

Overview
Journal J Biol Eng
Publisher Biomed Central
Date 2017 Nov 22
PMID 29158775
Citations 3
Authors
Affiliations
Soon will be listed here.
Abstract

Oxygen-responsive promoters can be useful for synthetic biology applications, however, information on their characteristics is still limited. Here, we characterized a group of heterologous microaerobic globin promoters in . Globin promoters from , , , , and were used to express the FMN-binding fluorescent protein (FbFP), which is a non-oxygen dependent marker. FbFP fluorescence was monitored online in cultures at maximum oxygen transfer capacities (OTR) of 7 and 11 mmol L h. Different FbFP fluorescence intensities were observed and the OTR affected the induction level and specific fluorescence emission rate (the product of the specific fluorescence intensity multiplied by the specific growth rate) of all promoters. The promoter from displayed the highest fluorescence emission yields (the quotient of the fluorescence intensity divided by the scattered light intensity at every time-point) and rate, and together with the promoters from and , the highest induction ratios. These results show the potential of diverse heterologous globin promoters for oxygen-limited processes using .

Citing Articles

Design of microaerobically inducible miniR1 plasmids.

Islas F, Sabido A, Sigala J, Lara A mLife. 2024; 2(1):101-104.

PMID: 38818336 PMC: 10989972. DOI: 10.1002/mlf2.12058.


Assessing the capabilities of 2D fluorescence monitoring in microtiter plates with data-driven modeling for secondary substrate limitation experiments of Hansenula polymorpha.

Berg C, Herbst L, Gremm L, Ihling N, Paquet-Durand O, Hitzmann B J Biol Eng. 2023; 17(1):12.

PMID: 36782293 PMC: 9926666. DOI: 10.1186/s13036-023-00332-0.


Microaerobic fermentation alters lactose metabolism in Escherichia coli.

Pandi K, Chauhan A, Gupta J, Rathore A Appl Microbiol Biotechnol. 2020; 104(13):5773-5785.

PMID: 32409946 DOI: 10.1007/s00253-020-10652-6.

References
1.
Funke M, Diederichs S, Kensy F, Muller C, Buchs J . The baffled microtiter plate: increased oxygen transfer and improved online monitoring in small scale fermentations. Biotechnol Bioeng. 2009; 103(6):1118-28. DOI: 10.1002/bit.22341. View

2.
Avila-Ramirez C, Tinajero-Trejo M, Davidge K, Monk C, Kelly D, Poole R . Do globins in microaerophilic Campylobacter jejuni confer nitrosative stress tolerance under oxygen limitation?. Antioxid Redox Signal. 2012; 18(4):424-31. PMC: 3526894. DOI: 10.1089/ars.2012.4750. View

3.
Lara A, Jaen K, Sigala J, Muhlmann M, Regestein L, Buchs J . Characterization of Endogenous and Reduced Promoters for Oxygen-Limited Processes Using Escherichia coli. ACS Synth Biol. 2016; 6(2):344-356. DOI: 10.1021/acssynbio.6b00233. View

4.
Crawford M, Goldberg D . Regulation of the Salmonella typhimurium flavohemoglobin gene. A new pathway for bacterial gene expression in response to nitric oxide. J Biol Chem. 1998; 273(51):34028-32. DOI: 10.1074/jbc.273.51.34028. View

5.
Mutalik V, Guimaraes J, Cambray G, Mai Q, Christoffersen M, Martin L . Quantitative estimation of activity and quality for collections of functional genetic elements. Nat Methods. 2013; 10(4):347-53. DOI: 10.1038/nmeth.2403. View