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A Post-transcriptional Program Coordinated by CSDE1 Prevents Intrinsic Neural Differentiation of Human Embryonic Stem Cells

Overview
Journal Nat Commun
Specialty Biology
Date 2017 Nov 14
PMID 29129916
Citations 33
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Abstract

While the transcriptional network of human embryonic stem cells (hESCs) has been extensively studied, relatively little is known about how post-transcriptional modulations determine hESC function. RNA-binding proteins play central roles in RNA regulation, including translation and turnover. Here we show that the RNA-binding protein CSDE1 (cold shock domain containing E1) is highly expressed in hESCs to maintain their undifferentiated state and prevent default neural fate. Notably, loss of CSDE1 accelerates neural differentiation and potentiates neurogenesis. Conversely, ectopic expression of CSDE1 impairs neural differentiation. We find that CSDE1 post-transcriptionally modulates core components of multiple regulatory nodes of hESC identity, neuroectoderm commitment and neurogenesis. Among these key pro-neural/neuronal factors, CSDE1 binds fatty acid binding protein 7 (FABP7) and vimentin (VIM) mRNAs, as well as transcripts involved in neuron projection development regulating their stability and translation. Thus, our results uncover CSDE1 as a central post-transcriptional regulator of hESC identity and neurogenesis.

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References
1.
Yukawa K, Tanaka T, Yoshida K, Takeuchi N, Ito T, Takamatsu H . Sema4A induces cell morphological changes through B-type plexin-mediated signaling. Int J Mol Med. 2010; 25(2):225-30. View

2.
Gerstberger S, Hafner M, Tuschl T . A census of human RNA-binding proteins. Nat Rev Genet. 2014; 15(12):829-45. PMC: 11148870. DOI: 10.1038/nrg3813. View

3.
Cornelis S, Tinton S, Schepens B, Bruynooghe Y, Beyaert R . UNR translation can be driven by an IRES element that is negatively regulated by polypyrimidine tract binding protein. Nucleic Acids Res. 2005; 33(10):3095-108. PMC: 1142345. DOI: 10.1093/nar/gki611. View

4.
Wilbert M, Huelga S, Kapeli K, Stark T, Liang T, Chen S . LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance. Mol Cell. 2012; 48(2):195-206. PMC: 3483422. DOI: 10.1016/j.molcel.2012.08.004. View

5.
Kamiya D, Banno S, Sasai N, Ohgushi M, Inomata H, Watanabe K . Intrinsic transition of embryonic stem-cell differentiation into neural progenitors. Nature. 2011; 470(7335):503-9. DOI: 10.1038/nature09726. View