Discovery from a Large-scaled Survey of Trichoderma in Soil of China

Overview

Journal Sci Rep

Specialty Science

Date 2017 Aug 24

PMID 28831112

Citations 28

Authors

Kai Chen

Wen-Ying Zhuang

Affiliations

Soon will be listed here.

Abstract

The first large-scaled survey of soil-inhabiting Trichoderma is conducted in 23 provinces of China. Twenty-three new species belonging to the green-ascospored clades are discovered. Their phylogenetic positions are determined by sequence analyses of the combined partial sequences of translation elongation factor 1-alpha and the second largest RNA polymerase subunit encoding genes. Morphology and culture characteristics are observed, described and illustrated in detail. Distinctions between the new species and their close relatives are compared and discussed. They are named as: T. aggregatum, T. alpinum, T. bannaense, T. breve, T. brevicrassum, T. byssinum, T. chlamydosporicum, T. concentricum, T. ganodermatis, T. hainanense, T. hengshanicum, T. hirsutum, T. hunanense, T. ingratum, T. liberatum, T. linzhiense, T. longisporum, T. polypori, T. pseudodensum, T. simplex, T. solum, T. undatipile and T. zayuense.

Citing Articles

collection from Brazilian soil reveals a new species: Sp. nov.

Peixoto G, da Silva R, Zacaroni A, Silva T, Chaverri P, Pinho D Front Microbiol. 2025; 16:1279142.

PMID: 40008049 PMC: 11850384. DOI: 10.3389/fmicb.2025.1279142.

: Harzianum Clade in Soils from Central and South America.

Ismaiel A, Jambhulkar P, Sinha P, Lakshman D J Fungi (Basel). 2024; 10(12).

PMID: 39728309 PMC: 11676294. DOI: 10.3390/jof10120813.

Unveiling two new species of (Hypocreales, Hypocreaceae) that cause green mold disease on from Guizhou Province, China.

Tarafder E, Wenjun Z, Karunarathna S, Elgorban A, Huilian M, Nan W MycoKeys. 2024; 110:361-383.

PMID: 39619667 PMC: 11607586. DOI: 10.3897/mycokeys.110.134154.

Diversity of species associated with the black rot disease of , including four new species.

Ye C, You Y, Li W, Jing T, Mo M, Qiao M Front Microbiol. 2024; 15:1420156.

PMID: 39132139 PMC: 11310069. DOI: 10.3389/fmicb.2024.1420156.

Plant Growth Promotion and Biological Control against in Thai Local Rice Variety "Chor Khing" Using Z2-03.

Intana W, Suwannarach N, Kumla J, Wonglom P, Sunpapao A J Fungi (Basel). 2024; 10(6).

PMID: 38921403 PMC: 11204415. DOI: 10.3390/jof10060417.

References

Park M, Bae K, Yu S . Two new species of trichoderma associated with green mold of oyster mushroom cultivation in Korea. Mycobiology. 2013; 34(3):111-3. PMC: 3769556. DOI: 10.4489/MYCO.2006.34.3.111. View

Sun R, Liu Z, Fu K, Fan L, Chen J . Trichoderma biodiversity in China. J Appl Genet. 2012; 53(3):343-54. DOI: 10.1007/s13353-012-0093-1. View

Jaklitsch W . European species of Hypocrea part II: species with hyaline ascospores. Fungal Divers. 2011; 48(1):1-250. PMC: 3189789. DOI: 10.1007/s13225-011-0088-y. View

Sun J, Pei Y, Li E, Li W, Hyde K, Yin W . A new species of Trichoderma hypoxylon harbours abundant secondary metabolites. Sci Rep. 2016; 6:37369. PMC: 5116760. DOI: 10.1038/srep37369. View

Druzhinina I, Kopchinskiy A, Komon M, Bissett J, Szakacs G, Kubicek C . An oligonucleotide barcode for species identification in Trichoderma and Hypocrea. Fungal Genet Biol. 2005; 42(10):813-28. DOI: 10.1016/j.fgb.2005.06.007. View

Jaklitsch W, Kubicek C, Druzhinina I . Three European species of Hypocrea with reddish brown stromata and green ascospores. Mycologia. 2008; 100(5):796-815. PMC: 3076890. DOI: 10.3852/08-039. View

Jaklitsch W, Komon M, Kubicek C, Druzhinina I . Hypocrea voglmayrii sp. nov. from the Austrian Alps represents a new phylogenetic clade in Hypocrea/Trichoderma. Mycologia. 2006; 97(6):1365-78. DOI: 10.3852/mycologia.97.6.1365. View

Sandoval-Denis M, Sutton D, Cano-Lira J, Gene J, Fothergill A, Wiederhold N . Phylogeny of the clinically relevant species of the emerging fungus Trichoderma and their antifungal susceptibilities. J Clin Microbiol. 2014; 52(6):2112-25. PMC: 4042759. DOI: 10.1128/JCM.00429-14. View

Ronquist F, Huelsenbeck J . MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003; 19(12):1572-4. DOI: 10.1093/bioinformatics/btg180. View

10.

Liu Y, Whelen S, Hall B . Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit. Mol Biol Evol. 1999; 16(12):1799-808. DOI: 10.1093/oxfordjournals.molbev.a026092. View

11.

Bischof R, Ramoni J, Seiboth B . Cellulases and beyond: the first 70 years of the enzyme producer Trichoderma reesei. Microb Cell Fact. 2016; 15(1):106. PMC: 4902900. DOI: 10.1186/s12934-016-0507-6. View

12.

Zhu Z, Zhuang W . Trichoderma (Hypocrea) species with green ascospores from China. Persoonia. 2015; 34:113-29. PMC: 4510275. DOI: 10.3767/003158515X686732. View

13.

Zhang C, Druzhinina I, Kubicek C, Xu T . Trichoderma biodiversity in China: evidence for a North to South distribution of species in East Asia. FEMS Microbiol Lett. 2005; 251(2):251-7. DOI: 10.1016/j.femsle.2005.08.034. View

14.

Komon-Zelazowska M, Bissett J, Zafari D, Hatvani L, Manczinger L, Woo S . Genetically closely related but phenotypically divergent Trichoderma species cause green mold disease in oyster mushroom farms worldwide. Appl Environ Microbiol. 2007; 73(22):7415-26. PMC: 2168202. DOI: 10.1128/AEM.01059-07. View

15.

Thompson J, Gibson T, Plewniak F, Jeanmougin F, Higgins D . The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1998; 25(24):4876-82. PMC: 147148. DOI: 10.1093/nar/25.24.4876. View

16.

Qin W, Zhuang W . Seven wood-inhabiting new species of the genus Trichoderma (Fungi, Ascomycota) in Viride clade. Sci Rep. 2016; 6:27074. PMC: 4888246. DOI: 10.1038/srep27074. View

17.

Jaklitsch W, Samuels G, Ismaiel A, Voglmayr H . Disentangling the Trichoderma viridescens complex. Persoonia. 2014; 31:112-46. PMC: 3904046. DOI: 10.3767/003158513X672234. View

18.

Jaklitsch W, Lechat C, Voglmayr H . The rise and fall of Sarawakus (Hypocreaceae, Ascomycota). Mycologia. 2014; 106(1):133-44. PMC: 4140013. DOI: 10.3852/13-117. View

19.

Al-Sadi A, Al-Oweisi F, Edwards S, Al-Nadabi H, Al-Fahdi A . Genetic analysis reveals diversity and genetic relationship among Trichoderma isolates from potting media, cultivated soil and uncultivated soil. BMC Microbiol. 2015; 15:147. PMC: 4517564. DOI: 10.1186/s12866-015-0483-8. View

20.

Chaverri P, Samuels G . Evolution of habitat preference and nutrition mode in a cosmopolitan fungal genus with evidence of interkingdom host jumps and major shifts in ecology. Evolution. 2013; 67(10):2823-37. DOI: 10.1111/evo.12169. View