A Checklist of the Bats of Peninsular Malaysia and Progress Towards a DNA Barcode Reference Library

Overview

Journal PLoS One

Specialties General Medicine
Science

Date 2017 Jul 26

PMID 28742835

Citations 3

Authors

Voon-Ching Lim

Rosli Ramli

Subha Bhassu

John-James Wilson

Affiliations

Soon will be listed here.

Abstract

Several published checklists of bat species have covered Peninsular Malaysia as part of a broader region and/or in combination with other mammal groups. Other researchers have produced comprehensive checklists for specific localities within the peninsula. To our knowledge, a comprehensive checklist of bats specifically for the entire geopolitical region of Peninsular Malaysia has never been published, yet knowing which species are present in Peninsular Malaysia and their distributions across the region are crucial in developing suitable conservation plans. Our literature search revealed that 110 bat species have been documented in Peninsular Malaysia; 105 species have precise locality records while five species lack recent and/or precise locality records. We retrieved 18 species from records dated before the year 2000 and seven species have only ever been recorded once. Our search of Barcode of Life Datasystems (BOLD) found that 86 (of the 110) species have public records of which 48 species have public DNA barcodes available from bats sampled in Peninsular Malaysia. Based on Neighbour-Joining tree analyses and the allocation of DNA barcodes to Barcode Index Number system (BINs) by BOLD, several DNA barcodes recorded under the same species name are likely to represent distinct taxa. We discuss these cases in detail and highlight the importance of further surveys to determine the occurences and resolve the taxonomy of particular bat species in Peninsular Malaysia, with implications for conservation priorities.

Citing Articles

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References

Kimura M . A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol. 1980; 16(2):111-20. DOI: 10.1007/BF01731581. View

Bickford D, Lohman D, Sodhi N, Ng P, Meier R, Winker K . Cryptic species as a window on diversity and conservation. Trends Ecol Evol. 2006; 22(3):148-55. DOI: 10.1016/j.tree.2006.11.004. View

Wilson J, Sing K, Halim M, Ramli R, Hashim R, Sofian-Azirun M . Utility of DNA barcoding for rapid and accurate assessment of bat diversity in Malaysia in the absence of formally described species. Genet Mol Res. 2014; 13(1):920-5. DOI: 10.4238/2014.February.19.2. View

Francis C, Borisenko A, Ivanova N, Eger J, Lim B, Guillen-Servent A . The role of DNA barcodes in understanding and conservation of mammal diversity in southeast Asia. PLoS One. 2010; 5(9):e12575. PMC: 2933245. DOI: 10.1371/journal.pone.0012575. View

Murray S, Campbell P, Kingston T, Zubaid A, Francis C, Kunz T . Molecular phylogeny of hipposiderid bats from Southeast Asia and evidence of cryptic diversity. Mol Phylogenet Evol. 2011; 62(2):597-611. DOI: 10.1016/j.ympev.2011.10.021. View

Appleton B, McKenzie J, Christidis L . Molecular systematics and biogeography of the bent-wing bat complex Miniopterus schreibersii (Kuhl, 1817) (Chiroptera: Vespertilionidae). Mol Phylogenet Evol. 2004; 31(2):431-9. DOI: 10.1016/j.ympev.2003.08.017. View

Ith S, Bumrungsri S, Furey N, Bates P, Wonglapsuwan M, Khan F . Taxonomic implications of geographical variation in (Chiroptera: Rhinolophidae) in mainland Southeast Asia. Zool Stud. 2020; 54:e31. PMC: 6661434. DOI: 10.1186/s40555-015-0109-8. View

Page R . DNA barcoding and taxonomy: dark taxa and dark texts. Philos Trans R Soc Lond B Biol Sci. 2016; 371(1702). PMC: 4971186. DOI: 10.1098/rstb.2015.0334. View

Kumar S, Stecher G, Tamura K . MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Mol Biol Evol. 2016; 33(7):1870-4. PMC: 8210823. DOI: 10.1093/molbev/msw054. View

10.

Ratnasingham S, Hebert P . A DNA-based registry for all animal species: the barcode index number (BIN) system. PLoS One. 2013; 8(7):e66213. PMC: 3704603. DOI: 10.1371/journal.pone.0066213. View

11.

Csorba G, Gorfol T, Wiantoro S, Kingston T, Bates P, Huang J . Thumb-pads up-a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus). Zootaxa. 2015; 3980(2):267-78. DOI: 10.11646/zootaxa.3980.2.7. View

12.

Aziz S, Clements G, Peng L, Campos-Arceiz A, McConkey K, Forget P . Elucidating the diet of the island flying fox () in Peninsular Malaysia through Illumina Next-Generation Sequencing. PeerJ. 2017; 5:e3176. PMC: 5391789. DOI: 10.7717/peerj.3176. View

13.

Kingston T, Lara M, Jones G, Akbar Z, Kunz T, Schneider C . Acoustic divergence in two cryptic Hipposideros species: a role for social selection?. Proc Biol Sci. 2001; 268(1474):1381-6. PMC: 1088752. DOI: 10.1098/rspb.2001.1630. View

14.

Ratnasingham S, Hebert P . bold: The Barcode of Life Data System (http://www.barcodinglife.org). Mol Ecol Notes. 2008; 7(3):355-364. PMC: 1890991. DOI: 10.1111/j.1471-8286.2007.01678.x. View

15.

Campbell P, Schneider C, Adnan A, Zubaid A, Kunz T . Phylogeny and phylogeography of Old World fruit bats in the Cynopterus brachyotis complex. Mol Phylogenet Evol. 2004; 33(3):764-81. DOI: 10.1016/j.ympev.2004.06.019. View

16.

Syaripuddin K, Kumar A, Sing K, Halim M, Nursyereen M, Wilson J . Mercury accumulation in bats near hydroelectric reservoirs in Peninsular Malaysia. Ecotoxicology. 2014; 23(7):1164-71. DOI: 10.1007/s10646-014-1258-y. View

17.

Shafie N, Mohd Sah S, Latip N, Azman N, Khairuddin N . Diversity Pattern of Bats at Two Contrasting Habitat Types along Kerian River, Perak, Malaysia. Trop Life Sci Res. 2014; 22(2):13-22. PMC: 3819087. View

18.

Lim L, Csorba G, Wong C, Zubaid A, Rahman S, Vijaya Kumaran J . The systematic position of Hypsugo macrotis (Chiroptera: Vespertilionidae) and a new record from Peninsular Malaysia. Zootaxa. 2016; 4170(1):169-177. DOI: 10.11646/zootaxa.4170.1.10. View