Deal C, De Wannemaeker L, De Mey M
FEMS Microbiol Rev. 2024; 48(2).
PMID: 38383636
PMC: 10911233.
DOI: 10.1093/femsre/fuae004.
Forquet R, Nasser W, Reverchon S, Meyer S
Nucleic Acids Res. 2022; 50(13):7287-7297.
PMID: 35776118
PMC: 9303308.
DOI: 10.1093/nar/gkac579.
Yu T, Liu W, Brinck M, Davis J, Shek J, Bower G
Nat Commun. 2021; 12(1):325.
PMID: 33436562
PMC: 7804116.
DOI: 10.1038/s41467-020-20094-3.
Ma J, Howe M
G3 (Bethesda). 2015; 5(4):507-16.
PMID: 25645531
PMC: 4390567.
DOI: 10.1534/g3.114.013607.
Lewis D, Le P, Adhya S
J Mol Biol. 2014; 427(4):792-806.
PMID: 25543084
PMC: 4401089.
DOI: 10.1016/j.jmb.2014.12.010.
The promoter spacer influences transcription initiation via sigma70 region 1.1 of Escherichia coli RNA polymerase.
Hook-Barnard I, Hinton D
Proc Natl Acad Sci U S A. 2009; 106(3):737-42.
PMID: 19139410
PMC: 2630097.
DOI: 10.1073/pnas.0808133106.
Transcription initiation by mix and match elements: flexibility for polymerase binding to bacterial promoters.
Hook-Barnard I, Hinton D
Gene Regul Syst Bio. 2009; 1:275-93.
PMID: 19119427
PMC: 2613000.
Programming gene expression with combinatorial promoters.
Cox 3rd R, Surette M, Elowitz M
Mol Syst Biol. 2007; 3:145.
PMID: 18004278
PMC: 2132448.
DOI: 10.1038/msb4100187.
The strong efficiency of the Escherichia coli gapA P1 promoter depends on a complex combination of functional determinants.
Thouvenot B, Charpentier B, Branlant C
Biochem J. 2004; 383(Pt 2):371-82.
PMID: 15250823
PMC: 1134079.
DOI: 10.1042/BJ20040792.
Identification and analysis of 'extended -10' promoters in Escherichia coli.
Mitchell J, Zheng D, Busby S, Minchin S
Nucleic Acids Res. 2003; 31(16):4689-95.
PMID: 12907708
PMC: 169978.
DOI: 10.1093/nar/gkg694.
Transcriptional activation of NtcA-dependent promoters of Synechococcus sp. PCC 7942 by 2-oxoglutarate in vitro.
Tanigawa R, Shirokane M, Omata T, Tanaka K, Takahashi H
Proc Natl Acad Sci U S A. 2002; 99(7):4251-5.
PMID: 11917135
PMC: 123634.
DOI: 10.1073/pnas.072587199.
DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study.
Burr T, Mitchell J, Kolb A, Minchin S, Busby S
Nucleic Acids Res. 2000; 28(9):1864-70.
PMID: 10756184
PMC: 103297.
DOI: 10.1093/nar/28.9.1864.
The -16 region of Bacillus subtilis and other gram-positive bacterial promoters.
Voskuil M, Chambliss G
Nucleic Acids Res. 1998; 26(15):3584-90.
PMID: 9671823
PMC: 147726.
DOI: 10.1093/nar/26.15.3584.
Identification and analysis of "extended -10" promoters from mycobacteria.
Bashyam M, Tyagi A
J Bacteriol. 1998; 180(9):2568-73.
PMID: 9573214
PMC: 107204.
DOI: 10.1128/JB.180.9.2568-2573.1998.
Strategies used by pathogenic and nonpathogenic mycobacteria to synthesize rRNA.
Gonzalez-Y-Merchand J, Garcia M, Colston M, Cox R
J Bacteriol. 1997; 179(22):6949-58.
PMID: 9371439
PMC: 179633.
DOI: 10.1128/jb.179.22.6949-6958.1997.
Non-canonical sequence elements in the promoter structure. Cluster analysis of promoters recognized by Escherichia coli RNA polymerase.
Ozoline O, Deev A, Arkhipova M
Nucleic Acids Res. 1998; 25(23):4703-9.
PMID: 9365247
PMC: 147123.
DOI: 10.1093/nar/25.23.4703.
Identification of a strong promoter of bacteriophage MB78 that lacks consensus sequence around minus 35 region and interacts with phage specific factor.
Zargar M, Pandey B, Sharma R, Chakravorty M
Virus Genes. 1997; 14(2):137-46.
PMID: 9237353
DOI: 10.1023/a:1007969301840.
Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters.
Barne K, Bown J, Busby S, Minchin S
EMBO J. 1997; 16(13):4034-40.
PMID: 9233812
PMC: 1170026.
DOI: 10.1093/emboj/16.13.4034.
Dissection of the transcription machinery for housekeeping genes of Bradyrhizobium japonicum.
Beck C, Marty R, Klausli S, Hennecke H, Gottfert M
J Bacteriol. 1997; 179(2):364-9.
PMID: 8990287
PMC: 178705.
DOI: 10.1128/jb.179.2.364-369.1997.
The sigma subunit of Escherichia coli RNA polymerase senses promoter spacing.
Dombroski A, Johnson B, Lonetto M, Gross C
Proc Natl Acad Sci U S A. 1996; 93(17):8858-62.
PMID: 8799117
PMC: 38558.
DOI: 10.1073/pnas.93.17.8858.