» Articles » PMID: 26693181

Long Noncoding RNAs in Cancer: from Function to Translation

Overview
Journal Trends Cancer
Publisher Cell Press
Specialty Oncology
Date 2015 Dec 23
PMID 26693181
Citations 141
Authors
Affiliations
Soon will be listed here.
Abstract

While our understanding of the molecular mechanisms underlying cancer has significantly improved, most of our knowledge focuses on protein-coding genes that make up a fraction of the genome. Recent studies have uncovered thousands of long noncoding RNAs (lncRNAs) that populate the cancer genome. A subset of these molecules shows striking cancer- and lineage-specific expression patterns, suggesting they may be potential drivers of cancer biology and have utility as clinical biomarkers. Here, we discuss emerging modalities of lncRNA biology and their interplay with cancer-associated concepts, including epigenetic regulation, DNA damage and cell cycle control, microRNA silencing, signal transduction pathways, and hormone-driven disease. Additionally, we highlight the translational impact of lncRNAs, tools for their mechanistic investigation, and directions for future lncRNA research.

Citing Articles

Investigating the role of exosomal long non-coding RNAs in drug resistance within female reproductive system cancers.

Shirani N, Abdi N, Chehelgerdi M, Yaghoobi H, Chehelgerdi M Front Cell Dev Biol. 2025; 13:1485422.

PMID: 39925739 PMC: 11802832. DOI: 10.3389/fcell.2025.1485422.


Loss-of-function in testis-specific serine/threonine protein kinase triggers male infertility in an invasive moth.

Wei Z, Wang Y, Zheng K, Wang Z, Liu R, Wang P Commun Biol. 2024; 7(1):1256.

PMID: 39363033 PMC: 11450154. DOI: 10.1038/s42003-024-06961-5.


Beyond traditional translation: ncRNA derived peptides as modulators of tumor behaviors.

Wen K, Chen X, Gu J, Chen Z, Wang Z J Biomed Sci. 2024; 31(1):63.

PMID: 38877495 PMC: 11177406. DOI: 10.1186/s12929-024-01047-0.


Integrating bulk and single-cell RNA sequencing data to establish necroptosis-related lncRNA risk model and analyze the immune microenvironment in hepatocellular carcinoma.

Zhang R, Li Q, Yu X, Hou Y, Yan L, Gao Y Heliyon. 2023; 9(11):e22083.

PMID: 38034714 PMC: 10685373. DOI: 10.1016/j.heliyon.2023.e22083.


Surmounting Cancer Drug Resistance: New Perspective on RNA-Binding Proteins.

Feng Y, Zhu S, Liu T, Zhi G, Shao B, Liu J Pharmaceuticals (Basel). 2023; 16(8).

PMID: 37631029 PMC: 10458901. DOI: 10.3390/ph16081114.


References
1.
Geary R, Norris D, Yu R, Bennett C . Pharmacokinetics, biodistribution and cell uptake of antisense oligonucleotides. Adv Drug Deliv Rev. 2015; 87:46-51. DOI: 10.1016/j.addr.2015.01.008. View

2.
Kadoch C, Hargreaves D, Hodges C, Elias L, Ho L, Ranish J . Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy. Nat Genet. 2013; 45(6):592-601. PMC: 3667980. DOI: 10.1038/ng.2628. View

3.
Reisman D, Glaros S, Thompson E . The SWI/SNF complex and cancer. Oncogene. 2009; 28(14):1653-68. DOI: 10.1038/onc.2009.4. View

4.
Du Z, Fei T, Verhaak R, Su Z, Zhang Y, Brown M . Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer. Nat Struct Mol Biol. 2013; 20(7):908-13. PMC: 3702647. DOI: 10.1038/nsmb.2591. View

5.
Steijger T, Abril J, Engstrom P, Kokocinski F, Hubbard T, Guigo R . Assessment of transcript reconstruction methods for RNA-seq. Nat Methods. 2013; 10(12):1177-84. PMC: 3851240. DOI: 10.1038/nmeth.2714. View