» Articles » PMID: 26489894

Distinct Processes and Transcriptional Targets Underlie CDX2 Requirements in Intestinal Stem Cells and Differentiated Villus Cells

Overview
Publisher Cell Press
Specialty Cell Biology
Date 2015 Oct 23
PMID 26489894
Citations 23
Authors
Affiliations
Soon will be listed here.
Abstract

Lgr5-expressing intestinal stem cells (ISCs) renew the adult gut epithelium by producing mature villus cells (VCs); the transcriptional basis for ISC functions remains unclear. RNA sequencing analysis identified transcripts modulated during differentiation of Lgr5(+) ISCs into VCs, with high expression of the intestine-restricted transcription factor (TF) gene Cdx2 in both populations. Cdx2-deleted mouse ISCs showed impaired proliferation and long-term inability to produce mature lineages, revealing essential ISC functions. Chromatin immunoprecipitation sequencing analysis of CDX2 in Lgr5(+) ISCs, coupled with mRNA profiling of control and Cdx2(-/-) ISCs, identified features of CDX2 regulation distinct from VCs. Most CDX2 binding in ISCs occurs in anticipation of future gene expression, but whereas CDX2 primarily activates VC genes, direct ISC targets are activated and repressed. Diverse CDX2 requirements in stem and differentiated cells may reflect the versatility of TFs that specify a tissue in development and control the same tissue in adults.

Citing Articles

Motif distribution and DNA methylation underlie distinct Cdx2 binding during development and homeostasis.

Lorzadeh A, Ye G, Sharma S, Jadhav U Nat Commun. 2025; 16(1):929.

PMID: 39843425 PMC: 11754732. DOI: 10.1038/s41467-025-56187-0.


Spatial characterization and stratification of colorectal adenomas by deep visual proteomics.

Kabatnik S, Post F, Drici L, Bartels A, Strauss M, Zheng X iScience. 2024; 27(9):110620.

PMID: 39252972 PMC: 11381895. DOI: 10.1016/j.isci.2024.110620.


Regulation of the THRA gene, encoding the thyroid hormone nuclear receptor TRα1, in intestinal lesions.

Giolito M, La Rosa T, Farhat D, Bodoirat S, Guardia G, Domon-Dell C Mol Oncol. 2022; 16(22):3975-3993.

PMID: 36217307 PMC: 9718118. DOI: 10.1002/1878-0261.13298.


A Core Response to the CDX2 Homeoprotein During Development and in Pathologies.

Gourain V, Duluc I, Domon-Dell C, Freund J Front Genet. 2021; 12:744165.

PMID: 34759958 PMC: 8573415. DOI: 10.3389/fgene.2021.744165.


Polycomb Repressive Complex(es) and Their Role in Adult Stem Cells.

Flora P, Dalal G, Cohen I, Ezhkova E Genes (Basel). 2021; 12(10).

PMID: 34680880 PMC: 8535826. DOI: 10.3390/genes12101485.


References
1.
Verzi M, Shin H, Ho L, Liu X, Shivdasani R . Essential and redundant functions of caudal family proteins in activating adult intestinal genes. Mol Cell Biol. 2011; 31(10):2026-39. PMC: 3133364. DOI: 10.1128/MCB.01250-10. View

2.
Tian H, Biehs B, Warming S, Leong K, Rangell L, Klein O . A reserve stem cell population in small intestine renders Lgr5-positive cells dispensable. Nature. 2011; 478(7368):255-9. PMC: 4251967. DOI: 10.1038/nature10408. View

3.
Itzkovitz S, Lyubimova A, Blat I, Maynard M, van Es J, Lees J . Single-molecule transcript counting of stem-cell markers in the mouse intestine. Nat Cell Biol. 2011; 14(1):106-14. PMC: 3292866. DOI: 10.1038/ncb2384. View

4.
Stringer E, Duluc I, Saandi T, Davidson I, Bialecka M, Sato T . Cdx2 determines the fate of postnatal intestinal endoderm. Development. 2011; 139(3):465-74. PMC: 3252350. DOI: 10.1242/dev.070722. View

5.
Hryniuk A, Grainger S, Savory J, Lohnes D . Cdx function is required for maintenance of intestinal identity in the adult. Dev Biol. 2012; 363(2):426-37. DOI: 10.1016/j.ydbio.2012.01.010. View