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Transposition of a Rice Mutator-like Element in the Yeast Saccharomyces Cerevisiae

Overview
Journal Plant Cell
Specialties Biology
Cell Biology
Date 2015 Jan 15
PMID 25587002
Citations 7
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Abstract

Mutator-like transposable elements (MULEs) are widespread in plants and are well known for their high transposition activity as well as their ability to duplicate and amplify host gene fragments. Despite their abundance and importance, few active MULEs have been identified. In this study, we demonstrated that a rice (Oryza sativa) MULE, Os3378, is capable of excising and reinserting in yeast (Saccharomyces cerevisiae), suggesting that yeast harbors all the host factors for the transposition of MULEs. The transposition activity induced by the wild-type transposase is low but can be altered by modification of the transposase sequence, including deletion, fusion, and substitution. Particularly, fusion of a fluorescent protein to the transposase enhanced the transposition activity, representing another approach to manipulate transposases. Moreover, we identified a critical region in the transposase where the net charge of the amino acids seems to be important for activity. Finally, transposition efficiency is also influenced by the element and its flanking sequences (i.e., small elements are more competent than their large counterparts). Perfect target site duplication is favorable, but not required, for precise excision. In addition to the potential application in functional genomics, this study provides the foundation for further studies of the transposition mechanism of MULEs.

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References
1.
Mullins M, Rio D, Rubin G . cis-acting DNA sequence requirements for P-element transposition. Genes Dev. 1989; 3(5):729-38. DOI: 10.1101/gad.3.5.729. View

2.
Talbert L, CHANDLER V . Characterization of a highly conserved sequence related to mutator transposable elements in maize. Mol Biol Evol. 1988; 5(5):519-29. DOI: 10.1093/oxfordjournals.molbev.a040510. View

3.
Ferguson A, Zhao D, Jiang N . Selective acquisition and retention of genomic sequences by Pack-Mutator-like elements based on guanine-cytosine content and the breadth of expression. Plant Physiol. 2013; 163(3):1419-32. PMC: 3813661. DOI: 10.1104/pp.113.223271. View

4.
Zayed H, Izsvak Z, Walisko O, Ivics Z . Development of hyperactive sleeping beauty transposon vectors by mutational analysis. Mol Ther. 2004; 9(2):292-304. DOI: 10.1016/j.ymthe.2003.11.024. View

5.
Marquez C, Pritham E . Phantom, a new subclass of Mutator DNA transposons found in insect viruses and widely distributed in animals. Genetics. 2010; 185(4):1507-17. PMC: 2927773. DOI: 10.1534/genetics.110.116673. View