» Articles » PMID: 2458567

Expression of the Human Amylase Genes: Recent Origin of a Salivary Amylase Promoter from an Actin Pseudogene

Overview
Specialty Biochemistry
Date 1988 Sep 12
PMID 2458567
Citations 17
Authors
Affiliations
Soon will be listed here.
Abstract

The human genes encoding salivary amylase (AMY1) and pancreatic amylase (AMY2) are nearly identical in structure and sequence. We have used ribonuclease protection studies to identify the functional gene copies in this multigene family. Riboprobes derived from each gene were hybridized to RNA from human pancreas, parotid and liver. The sizes of the protected fragments demonstrated that both pancreatic genes are expressed in pancreas. One of the pancreatic genes, AMY2B, is also transcribed at a low level in liver, but not from the promoter used in pancreas. AMY1 transcripts were detected in parotid, but not in pancreas or liver. Unexpected fragments protected by liver RNA led to the discovery that the 5' regions of the five human amylase genes contain a processed gamma-actin pseudogene. The promoter and start site for transcription of AMY1 are recently derived from the 3' untranslated region of gamma-actin. In addition, insertion of an endogenous retrovirus has interrupted the gamma-actin pseudogene in four of the five amylase genes.

Citing Articles

Promoter expression of HERV-K (HML-2) provirus-derived sequences is related to LTR sequence variation and polymorphic transcription factor binding sites.

Montesion M, Williams Z, Subramanian R, Kuperwasser C, Coffin J Retrovirology. 2018; 15(1):57.

PMID: 30126415 PMC: 6102855. DOI: 10.1186/s12977-018-0441-2.


Exome sequencing and arrayCGH detection of gene sequence and copy number variation between ILS and ISS mouse strains.

Dumas L, Dickens C, Anderson N, Davis J, Bennett B, Radcliffe R Mamm Genome. 2014; 25(5-6):235-43.

PMID: 24553828 PMC: 5512554. DOI: 10.1007/s00335-014-9502-6.


Dietary and flight energetic adaptations in a salivary gland transcriptome of an insectivorous bat.

Phillips C, Phillips C, Goecks J, Lessa E, Sotero-Caio C, Tandler B PLoS One. 2014; 9(1):e83512.

PMID: 24454705 PMC: 3891661. DOI: 10.1371/journal.pone.0083512.


Sequence and expression of an α-amylase gene in four related species of prickleback fishes (Teleostei: Stichaeidae): ontogenetic, dietary, and species-level effects.

Kim K, Horn M, Sosa A, German D J Comp Physiol B. 2013; 184(2):221-34.

PMID: 24136006 DOI: 10.1007/s00360-013-0780-1.


Endogenous retrovirus EAV-HP linked to blue egg phenotype in Mapuche fowl.

Wragg D, Mwacharo J, Alcalde J, Wang C, Han J, Gongora J PLoS One. 2013; 8(8):e71393.

PMID: 23990950 PMC: 3747184. DOI: 10.1371/journal.pone.0071393.


References
1.
Griffiths L, Zwi M, McLeod J, Nicholson G . Chromosome I linkage studies in Charcot-Marie-Tooth neuropathy type I. Am J Hum Genet. 1988; 42(5):756-71. PMC: 1715168. View

2.
Horii A, Emi M, Tomita N, Nishide T, Ogawa M, Mori T . Primary structure of human pancreatic alpha-amylase gene: its comparison with human salivary alpha-amylase gene. Gene. 1987; 60(1):57-64. DOI: 10.1016/0378-1119(87)90213-7. View

3.
Gumucio D, Wiebauer K, Caldwell R, Samuelson L, Meisler M . Concerted evolution of human amylase genes. Mol Cell Biol. 1988; 8(3):1197-205. PMC: 363264. DOI: 10.1128/mcb.8.3.1197-1205.1988. View

4.
Groot P, Bleeker M, Pronk J, Arwert F, Mager W, Planta R . Human pancreatic amylase is encoded by two different genes. Nucleic Acids Res. 1988; 16(10):4724. PMC: 336663. DOI: 10.1093/nar/16.10.4724. View

5.
Schibler U, SHAW P, Sierra F, Hagenbuchle O, Wellauer P, Carneiro M . Structural arrangement and tissue-specific expression of the two murine alpha-amylase loci Amy-1 and Amy-2. Oxf Surv Eukaryot Genes. 1986; 3:210-34. View