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Transcription of Ribosomal DNA in Chloroplasts of Spirodela Oligorhizaa

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Journal Curr Genet
Specialty Genetics
Date 2013 Nov 1
PMID 24173515
Citations 10
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Abstract

The genes for the two large ribosomal RNAs (16S and 23S) and for the 4.5S rRNA in Spirodela oligorhiza chloroplast DNA are transcribed as one large, 7,000 nucleotides long precursor rRNA.Using S1-nuclease mapping, we have determined that the transcript ends 135 nucleotides 3' distal of the 4.5S rRNA gene. 5S rRNA therefore, is most likely transcribed separately.Northern blotting of chloroplast RNA with distinct probes derived from the rDNA region reveals RNAs, which can be described as intermediates in the processing of the large precursor. With these findings a pathway for the maturation of this precursor is proposed.

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References
1.
Arnberg A, van Ommen G, Grivell L, van Bruggen E, Borst P . Some yeast mitochondrial RNAs are circular. Cell. 1980; 19(2):313-9. DOI: 10.1016/0092-8674(80)90505-x. View

2.
van Ommen G, Groot G, Grivell L . Transcription maps of mtDNAs of two strains of saccharomyces: transcription of strain-specific insertions; Complex RNA maturation and splicing. Cell. 1979; 18(2):511-23. DOI: 10.1016/0092-8674(79)90068-0. View

3.
Berk A, Sharp P . Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids. Cell. 1977; 12(3):721-32. DOI: 10.1016/0092-8674(77)90272-0. View

4.
Hartley M, Head C . The synthesis of chloroplast high-molecular-weight ribosomal ribonucleic acid in spinach. Eur J Biochem. 1979; 96(2):301-9. DOI: 10.1111/j.1432-1033.1979.tb13041.x. View

5.
Bedbrook J, Kolodner R, Bogorad L . Zea mays chloroplast ribosomal RNA genes are part of a 22,000 base pair inverted repeat. Cell. 1977; 11(4):739-49. DOI: 10.1016/0092-8674(77)90288-4. View