In Vitro Microtubule Severing Assays
Overview
Affiliations
Microtubules are rigid and highly dynamic cellular polymers essential for intracellular transport, cell division and differentiation. Their stability is tightly regulated by a vast array of cellular factors. In vitro microtubule assays have proven to be powerful tools for deciphering the mechanism of microtubule dynamics regulators such as molecular motors and microtubule associated proteins. In this chapter we focus on microtubule severing enzymes that use the energy of ATP hydrolysis to introduce internal breaks in the microtubule lattice. We present a detailed protocol for a light microscopy based in vitro microtubule severing assay that was instrumental in the identification and characterization of these enzymes.
Multi-camera Simultaneous Total Internal Reflection and Interference Reflection Microscopy.
Spector J, Chen J, Roll-Mecak A bioRxiv. 2024; .
PMID: 39372801 PMC: 11451753. DOI: 10.1101/2024.08.28.610099.
Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Chen J, Zehr E, Gruschus J, Szyk A, Liu Y, Tanner M Nature. 2024; 631(8022):905-912.
PMID: 39020174 DOI: 10.1038/s41586-024-07699-0.
Structural basis for α-tubulin-specific and modification state-dependent glutamylation.
Mahalingan K, Grotjahn D, Li Y, Lander G, Zehr E, Roll-Mecak A Nat Chem Biol. 2024; 20(11):1493-1504.
PMID: 38658656 PMC: 11529724. DOI: 10.1038/s41589-024-01599-0.
Ultrasensitivity of microtubule severing due to damage repair.
Shiff C, Kondev J, Mohapatra L iScience. 2024; 27(2):108874.
PMID: 38327774 PMC: 10847648. DOI: 10.1016/j.isci.2024.108874.
Szczesna E, Zehr E, Cummings S, Szyk A, Mahalingan K, Li Y Dev Cell. 2022; 57(21):2497-2513.e6.
PMID: 36347241 PMC: 9665884. DOI: 10.1016/j.devcel.2022.10.003.