RETRACTED ARTICLE: Culturomics Identified 11 New Bacterial Species from a Single Anorexia Nervosa Stool Sample

Overview

Journal Eur J Clin Microbiol Infect Dis

Publisher Springer

Specialties Infectious Diseases
Microbiology

Date 2013 Jun 4

PMID 23728738

Citations 63

Authors

A Pfleiderer

J-C Lagier

F Armougom

C Robert

B Vialettes

D Raoult

Affiliations

Soon will be listed here.

Abstract

The Editor-in-Chief has retracted this article because the authors were not able to confirm that they obtained informed consent to publish identifying information about the patient who provided the sample used in this research. The content of this article is no longer available online to protect patient confidentiality. J.-C. Lagier disagrees with this retraction. D. Raoult and C. Robert did not respond to correspondence from the Publisher regarding this retraction. The Publish was not able to obtain current contact emails for A. Pfleiderer, F. Armougom, and B. Vialettes.

Citing Articles

Using Bomb Calorimetry to Investigate Intestinal Energy Harvest in Anorexia Nervosa: Preliminary Findings on Stool Calorie Loss.

Reed K, Bulik-Sullivan E, Qian Y, Javorsky E, Tarantino L, Fodor A Int J Eat Disord. 2024; 58(2):440-445.

PMID: 39569450 PMC: 11864890. DOI: 10.1002/eat.24331.

Unraveling the Microbiome-Human Body Axis: A Comprehensive Examination of Therapeutic Strategies, Interactions and Implications.

Olteanu G, Ciuca-Pana M, Busnatu S, Lupuliasa D, Neacsu S, Mititelu M Int J Mol Sci. 2024; 25(10).

PMID: 38791599 PMC: 11122276. DOI: 10.3390/ijms25105561.

Streptinone, a New Indanone Derivative from a Marine-Derived Inhibits Particulate Matter-Induced Inflammation.

Lee H, Nagahawatta D, Jeon Y, Lee M, Heo C, Park S Mar Drugs. 2023; 21(12).

PMID: 38132961 PMC: 10744446. DOI: 10.3390/md21120640.

Anorexia nervosa and inflammatory bowel diseases-Diagnostic and genetic associations.

Larsen J, Yilmaz Z, Vilhjalmsson B, Thornton L, Benros M, Musliner K JCPP Adv. 2023; 1(4):e12036.

PMID: 37431410 PMC: 10242845. DOI: 10.1002/jcv2.12036.

Insight into gut dysbiosis of patients with inflammatory bowel disease and ischemic colitis.

Dahal R, Kim S, Kim Y, Kim E, Kim J Front Microbiol. 2023; 14:1174832.

PMID: 37250025 PMC: 10211348. DOI: 10.3389/fmicb.2023.1174832.

References

Janda J, Abbott S . 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls. J Clin Microbiol. 2007; 45(9):2761-4. PMC: 2045242. DOI: 10.1128/JCM.01228-07. View

Mishra A, Lagier J, Robert C, Raoult D, Fournier P . Non contiguous-finished genome sequence and description of Peptoniphilus timonensis sp. nov. Stand Genomic Sci. 2013; 7(1):1-11. PMC: 3570796. DOI: 10.4056/sigs.2956294. View

Schloss P, Westcott S, Ryabin T, Hall J, Hartmann M, Hollister E . Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol. 2009; 75(23):7537-41. PMC: 2786419. DOI: 10.1128/AEM.01541-09. View

Kaeberlein T, Lewis K, Epstein S . Isolating "uncultivable" microorganisms in pure culture in a simulated natural environment. Science. 2002; 296(5570):1127-9. DOI: 10.1126/science.1070633. View

Eller C, Crabill M, Bryant M . Anaerobic roll tube media for nonselective enumeration and isolation of bacteria in human feces. Appl Microbiol. 1971; 22(4):522-9. PMC: 376355. DOI: 10.1128/am.22.4.522-529.1971. View

Roux V, El Karkouri K, Lagier J, Robert C, Raoult D . Non-contiguous finished genome sequence and description of Kurthia massiliensis sp. nov. Stand Genomic Sci. 2013; 7(2):221-32. PMC: 3569394. DOI: 10.4056/sigs.3206554. View

Lagier J, Ramasamy D, Rivet R, Raoult D, Fournier P . Non contiguous-finished genome sequence and description of Cellulomonas massiliensis sp. nov. Stand Genomic Sci. 2013; 7(2):258-70. PMC: 3569388. DOI: 10.4056/sigs.3316719. View

Lagier J, Armougom F, Mishra A, Nguyen T, Raoult D, Fournier P . Non-contiguous finished genome sequence and description of Alistipes timonensis sp. nov. Stand Genomic Sci. 2013; 6(3):315-24. PMC: 3558960. DOI: 10.4056/sigs.2685971. View

Dubourg G, Lagier J, Armougom F, Robert C, Audoly G, Papazian L . High-level colonisation of the human gut by Verrucomicrobia following broad-spectrum antibiotic treatment. Int J Antimicrob Agents. 2013; 41(2):149-55. DOI: 10.1016/j.ijantimicag.2012.10.012. View

10.

Armougom F, Henry M, Vialettes B, Raccah D, Raoult D . Monitoring bacterial community of human gut microbiota reveals an increase in Lactobacillus in obese patients and Methanogens in anorexic patients. PLoS One. 2009; 4(9):e7125. PMC: 2742902. DOI: 10.1371/journal.pone.0007125. View

11.

Wren M . Multiple selective media for the isolation of anaerobic bacteria from clinical specimens. J Clin Pathol. 1980; 33(1):61-5. PMC: 1145983. DOI: 10.1136/jcp.33.1.61. View

12.

Kokcha S, Mishra A, Lagier J, Million M, Leroy Q, Raoult D . Non contiguous-finished genome sequence and description of Bacillus timonensis sp. nov. Stand Genomic Sci. 2013; 6(3):346-55. PMC: 3558959. DOI: 10.4056/sigs.2776064. View

13.

Seng P, Drancourt M, Gouriet F, La Scola B, Fournier P, Rolain J . Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin Infect Dis. 2009; 49(4):543-51. DOI: 10.1086/600885. View

14.

Nichols D, Cahoon N, Trakhtenberg E, Pham L, Mehta A, Belanger A . Use of ichip for high-throughput in situ cultivation of "uncultivable" microbial species. Appl Environ Microbiol. 2010; 76(8):2445-50. PMC: 2849220. DOI: 10.1128/AEM.01754-09. View

15.

Parte A . LPSN--list of prokaryotic names with standing in nomenclature. Nucleic Acids Res. 2013; 42(Database issue):D613-6. PMC: 3965054. DOI: 10.1093/nar/gkt1111. View

16.

Lagier J, Gimenez G, Robert C, Raoult D, Fournier P . Non-contiguous finished genome sequence and description of Herbaspirillum massiliense sp. nov. Stand Genomic Sci. 2013; 7(2):200-9. PMC: 3569391. DOI: 10.4056/sigs.3086474. View

17.

Kokcha S, Ramasamy D, Lagier J, Robert C, Raoult D, Fournier P . Non-contiguous finished genome sequence and description of Brevibacterium senegalense sp. nov. Stand Genomic Sci. 2013; 7(2):233-45. PMC: 3569389. DOI: 10.4056/sigs.3256677. View

18.

Lagier J, Armougom F, Million M, Hugon P, Pagnier I, Robert C . Microbial culturomics: paradigm shift in the human gut microbiome study. Clin Microbiol Infect. 2012; 18(12):1185-93. DOI: 10.1111/1469-0691.12023. View

19.

Gorlas A, Robert C, Gimenez G, Drancourt M, Raoult D . Complete genome sequence of Methanomassiliicoccus luminyensis, the largest genome of a human-associated Archaea species. J Bacteriol. 2012; 194(17):4745. PMC: 3415480. DOI: 10.1128/JB.00956-12. View

20.

Arank A, Syed S, Kenney E, Freter R . Isolation of anaerobic bacteria from human gingiva and mouse cecum by means of a simplified glove box procedure. Appl Microbiol. 1969; 17(4):568-76. PMC: 377745. DOI: 10.1128/am.17.4.568-576.1969. View