» Articles » PMID: 23341493

Genomic Insights into Cancer-associated Aberrant CpG Island Hypermethylation

Overview
Date 2013 Jan 24
PMID 23341493
Citations 64
Authors
Affiliations
Soon will be listed here.
Abstract

Carcinogenesis is thought to occur through a combination of mutational and epimutational events that disrupt key pathways regulating cellular growth and division. The DNA methylomes of cancer cells can exhibit two striking differences from normal cells; a global reduction of DNA methylation levels and the aberrant hypermethylation of some sequences, particularly CpG islands (CGIs). This aberrant hypermethylation is often invoked as a mechanism causing the transcriptional inactivation of tumour suppressor genes that directly drives the carcinogenic process. Here, we review our current understanding of this phenomenon, focusing on how global analysis of cancer methylomes indicates that most affected CGI genes are already silenced prior to aberrant hypermethylation during cancer development. We also discuss how genome-scale analyses of both normal and cancer cells have refined our understanding of the elusive mechanism(s) that may underpin aberrant CGI hypermethylation.

Citing Articles

Using human disease mutations to understand de novo DNA methyltransferase function.

Rolls W, Wilson M, Sproul D Biochem Soc Trans. 2024; 52(5):2059-2075.

PMID: 39446312 PMC: 11555716. DOI: 10.1042/BST20231017.


Interconnected Codons: Unravelling the Epigenetic Significance of Flanking Sequences in CpG Dyads.

Creasey L, Tauber E J Mol Evol. 2024; 92(3):207-216.

PMID: 38634873 PMC: 11169003. DOI: 10.1007/s00239-024-10172-1.


Reshaping the Landscape of the Genome: Toolkits for Precise DNA Methylation Manipulation and Beyond.

Zhu C, Hao Z, Liu D JACS Au. 2024; 4(1):40-57.

PMID: 38274248 PMC: 10806789. DOI: 10.1021/jacsau.3c00671.


The Emerging Role of Liquid Biopsies in Revolutionising Cancer Diagnosis and Therapy.

Shegekar T, Vodithala S, Juganavar A Cureus. 2023; 15(8):e43650.

PMID: 37719630 PMC: 10505053. DOI: 10.7759/cureus.43650.


Sequence-Based Platforms for Discovering Biomarkers in Liquid Biopsy of Non-Small-Cell Lung Cancer.

Brockley L, Souza V, Forder A, Pewarchuk M, Erkan M, Telkar N Cancers (Basel). 2023; 15(8).

PMID: 37190212 PMC: 10136462. DOI: 10.3390/cancers15082275.


References
1.
Esteller M, Silva J, Dominguez G, Bonilla F, Matias-Guiu X, Lerma E . Promoter hypermethylation and BRCA1 inactivation in sporadic breast and ovarian tumors. J Natl Cancer Inst. 2000; 92(7):564-9. DOI: 10.1093/jnci/92.7.564. View

2.
Issa J, Vertino P, Wu J, Sazawal S, Celano P, Nelkin B . Increased cytosine DNA-methyltransferase activity during colon cancer progression. J Natl Cancer Inst. 1993; 85(15):1235-40. DOI: 10.1093/jnci/85.15.1235. View

3.
Baylin S, Jones P . A decade of exploring the cancer epigenome - biological and translational implications. Nat Rev Cancer. 2011; 11(10):726-34. PMC: 3307543. DOI: 10.1038/nrc3130. View

4.
Ruiz S, Diep D, Gore A, Panopoulos A, Montserrat N, Plongthongkum N . Identification of a specific reprogramming-associated epigenetic signature in human induced pluripotent stem cells. Proc Natl Acad Sci U S A. 2012; 109(40):16196-201. PMC: 3479609. DOI: 10.1073/pnas.1202352109. View

5.
Abdel-Wahab O, Mullally A, Hedvat C, Garcia-Manero G, Patel J, Wadleigh M . Genetic characterization of TET1, TET2, and TET3 alterations in myeloid malignancies. Blood. 2009; 114(1):144-7. PMC: 2710942. DOI: 10.1182/blood-2009-03-210039. View