Chemical Proteomics: Ligation and Cleavage of Protein Modifications
Overview
Affiliations
Bioorthogonal ligation and cleavage methods are of major importance in the field of chemical biology. Recently, there has been significant progress in the improvement of classic ligation procedures as well as in the establishment of new ligation methodologies. Furthermore, the design of cleavable linkers for protein enrichment has lately received much attention. These techniques equip researchers with a wealth of tools suitable for proteomic applications. In order to ease navigation through these diverse systems, we here provide a comprehensive overview of methods that are useful for chemical proteomics.
Chemical Proteomics Strategies for Analyzing Protein Lipidation Reveal the Bacterial -Mycoloylome.
Banahene N, Peters-Clarke T, Biegas K, Shishkova E, Hart E, McKitterick A J Am Chem Soc. 2024; 146(17):12138-12154.
PMID: 38635392 PMC: 11066868. DOI: 10.1021/jacs.4c02278.
Reactivity-based screening for natural product discovery.
Harris L, Mitchell D Methods Enzymol. 2022; 665:177-208.
PMID: 35379434 PMC: 9183948. DOI: 10.1016/bs.mie.2021.11.018.
Zhao Y, Miranda Herrera P, Chang D, Hamelin R, Long M, Aye Y Proc Natl Acad Sci U S A. 2022; 119(5).
PMID: 35082156 PMC: 8812531. DOI: 10.1073/pnas.2120687119.
Control of RNA with quinone methide reversible acylating reagents.
Park H, Jash B, Xiao L, Jun Y, Kool E Org Biomol Chem. 2021; 19(38):8367-8376.
PMID: 34528657 PMC: 8609948. DOI: 10.1039/d1ob01713f.
Bioorthogonal Ligations and Cleavages in Chemical Biology.
Li Y, Fu H ChemistryOpen. 2020; 9(8):835-853.
PMID: 32817809 PMC: 7426781. DOI: 10.1002/open.202000128.