» Articles » PMID: 22253695

A "crossomics" Study Analysing Variability of Different Components in Peripheral Blood of Healthy Caucasoid Individuals

Abstract

Background: Different immunotherapy approaches for the treatment of cancer and autoimmune diseases are being developed and tested in clinical studies worldwide. Their resulting complex experimental data should be properly evaluated, therefore reliable normal healthy control baseline values are indispensable.

Methodology/principal Findings: To assess intra- and inter-individual variability of various biomarkers, peripheral blood of 16 age and gender equilibrated healthy volunteers was sampled on 3 different days within a period of one month. Complex "crossomics" analyses of plasma metabolite profiles, antibody concentrations and lymphocyte subset counts as well as whole genome expression profiling in CD4+T and NK cells were performed. Some of the observed age, gender and BMI dependences are in agreement with the existing knowledge, like negative correlation between sex hormone levels and age or BMI related increase in lipids and soluble sugars. Thus we can assume that the distribution of all 39.743 analysed markers is well representing the normal Caucasoid population. All lymphocyte subsets, 20% of metabolites and less than 10% of genes, were identified as highly variable in our dataset.

Conclusions/significance: Our study shows that the intra-individual variability was at least two-fold lower compared to the inter-individual one at all investigated levels, showing the importance of personalised medicine approach from yet another perspective.

Citing Articles

Inferring gene regulatory networks of ALS from blood transcriptome profiles.

Pappalardo X, Jansen G, Amaradio M, Costanza J, Umeton R, Guarino F Heliyon. 2024; 10(23):e40696.

PMID: 39687198 PMC: 11648123. DOI: 10.1016/j.heliyon.2024.e40696.


Deconvolution of bulk blood eQTL effects into immune cell subpopulations.

Aguirre-Gamboa R, de Klein N, di Tommaso J, Claringbould A, van der Wijst M, de Vries D BMC Bioinformatics. 2020; 21(1):243.

PMID: 32532224 PMC: 7291428. DOI: 10.1186/s12859-020-03576-5.


Differential CpG DNA methylation in peripheral naïve CD4 T-cells in early rheumatoid arthritis patients.

Pitaksalee R, Burska A, Ajaib S, Rogers J, Parmar R, Mydlova K Clin Epigenetics. 2020; 12(1):54.

PMID: 32264938 PMC: 7137446. DOI: 10.1186/s13148-020-00837-1.


Advances in Nutritional Metabolomics.

Ryan E, Heuberger A, Broeckling C, Borresen E, Tillotson C, Prenni J Curr Metabolomics. 2018; 1(2):109-120.

PMID: 29682447 PMC: 5909708. DOI: 10.2174/2213235x11301020001.


Characterization and differentiation of equine experimental local and early systemic inflammation by expression responses of inflammation-related genes in peripheral blood leukocytes.

Vinther A, Heegaard P, Skovgaard K, Buhl R, Andreassen S, Andersen P BMC Vet Res. 2016; 12:83.

PMID: 27250718 PMC: 4888743. DOI: 10.1186/s12917-016-0706-8.


References
1.
Cotterill L, Payne D, Levinson S, Mclaughlin J, Wesley E, Feeney M . Replication and meta-analysis of 13,000 cases defines the risk for interleukin-23 receptor and autophagy-related 16-like 1 variants in Crohn's disease. Can J Gastroenterol. 2010; 24(5):297-302. PMC: 2886570. DOI: 10.1155/2010/480458. View

2.
Atzori L, Antonucci R, Barberini L, Griffin J, Fanos V . Metabolomics: a new tool for the neonatologist. J Matern Fetal Neonatal Med. 2009; 22 Suppl 3:50-3. DOI: 10.1080/14767050903181500. View

3.
Trautwein E, Hayes K . Taurine concentrations in plasma and whole blood in humans: estimation of error from intra- and interindividual variation and sampling technique. Am J Clin Nutr. 1990; 52(4):758-64. DOI: 10.1093/ajcn/52.4.758. View

4.
Gwinner W . Renal transplant rejection markers. World J Urol. 2007; 25(5):445-55. DOI: 10.1007/s00345-007-0211-6. View

5.
Takahashi S, Miura N, Harada T, Wang Z, Wang X, Tsubokura H . Prognostic impact of clinical course-specific mRNA expression profiles in the serum of perioperative patients with esophageal cancer in the ICU: a case control study. J Transl Med. 2010; 8:103. PMC: 2984412. DOI: 10.1186/1479-5876-8-103. View